Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC073055.1-201ENST00000456901 1621 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 MCTS2P-201ENST00000394552 546 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 RPL23AP17-201ENST00000401064 499 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 MTND4P13-201ENST00000402078 1023 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 RPS27AP11-201ENST00000402798 447 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL136310.1-201ENST00000404926 654 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC105402.1-201ENST00000413336 545 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC246680.2-201ENST00000422106 389 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC079807.1-201ENST00000429993 481 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC092170.1-201ENST00000440211 356 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 EEF1A1P39-201ENST00000440791 250 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 HMGB3P6-201ENST00000444896 598 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL022237.1-201ENST00000446663 358 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 VN1R38P-201ENST00000450265 887 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 RBMY2TP-201ENST00000451162 947 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC015524.1-201ENST00000491585 472 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC095052.1-201ENST00000509955 863 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC074087.1-201ENST00000512059 724 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 OR4C49P-201ENST00000563891 900 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC011447.2-201ENST00000592921 283 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AL137000.1-201ENST00000610528 1244 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC005277.2-201ENST00000617898 390 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC005899.7-201ENST00000618199 588 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AP001264.1-201ENST00000620602 703 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC073593.1-201ENST00000624500 411 ntBASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCM2LQ9NUG4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 SAMMSON-210ENST00000641260 1308 ntBASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 MTND4P8-201ENST00000514997 1362 ntBASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 CDC27P2-201ENST00000425026 1922 ntBASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 AC074141.1-201ENST00000588129 2995 ntBASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 SHQ1P1-201ENST00000437111 1544 ntBASIC6.15□□□□□ -1.43
CCM2LQ9NUG4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 BX284613.1-201ENST00000452221 1641 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms