Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 DLEU2L-201ENST00000371086 3555 ntBASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.75□□□□□ -1.49
SSBP3Q9BWW4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AL359715.4-201ENST00000606629 1436 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LPAL2-203ENST00000454031 2498 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 Y_RNA.813-201ENST00000364639 102 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RNA5SP152-201ENST00000365184 110 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC121334.1-201ENST00000396414 802 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RN7SKP33-201ENST00000410942 340 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 OR4K6P-201ENST00000416478 897 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 KCTD9P1-201ENST00000430462 1167 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 CCRL1P1-201ENST00000449542 1053 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 GOT2P2-201ENST00000450663 1251 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RN7SL379P-201ENST00000479912 293 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 HMGB1P36-201ENST00000487709 576 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RPS4XP23-201ENST00000487801 237 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RN7SL350P-201ENST00000492591 299 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 KRT19P6-201ENST00000510983 209 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 MRPS5P3-201ENST00000515577 166 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RNA5SP278-201ENST00000517055 102 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 MTCYBP19-201ENST00000517463 1124 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AP001317.1-201ENST00000531194 960 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC012435.1-202ENST00000568772 240 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC091805.2-201ENST00000603848 235 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC005034.5-201ENST00000604219 466 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 NDUFA8P1-201ENST00000605525 367 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC006566.1-201ENST00000608943 513 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC015726.3-201ENST00000624501 418 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC183089.2-201ENST00000637931 916 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms