Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 RNA5SP335-201ENST00000363817 110 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC009784.1-201ENST00000426484 460 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AL035090.1-201ENST00000454835 332 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC007386.1-201ENST00000455212 582 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC087360.1-201ENST00000518788 616 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC005341.1-201ENST00000571086 708 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 RBM22P1-201ENST00000578589 1214 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 RN7SL356P-201ENST00000582228 248 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC060766.1-201ENST00000590824 627 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC079395.2-201ENST00000610982 737 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC010632.3-201ENST00000611377 369 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC005840.5-201ENST00000619166 599 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 MIR4302-201ENST00000638058 60 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 GVINP1-202ENST00000531871 7271 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AL353796.1-201ENST00000561542 3241 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 RNU1-77P-201ENST00000390868 162 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 OR3A2-201ENST00000408891 1076 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 RN7SKP206-201ENST00000410823 293 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 DSTNP5-201ENST00000427921 523 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 NPM1P18-201ENST00000434232 732 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 CYCSP6-201ENST00000434498 302 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 TAAR4P-201ENST00000454843 1039 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 RPL7P45-201ENST00000455851 743 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 SEPT10P1-201ENST00000517342 1162 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 OR4A43P-201ENST00000532938 908 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 MIR7853-201ENST00000584820 132 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC108738.1-201ENST00000603703 237 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC244107.2-201ENST00000611773 76 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AL359513.1-201ENST00000614364 557 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AC003973.3-201ENST00000624863 2822 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 MAPK10-261ENST00000641050 3109 ntBASIC4.5□□□□□ -1.69
GAFA1Q96PS6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.5□□□□□ -1.69
GAFA1Q96PS6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC009804.1-201ENST00000400949 179 ntBASIC4.49□□□□□ -1.69
GAFA1Q96PS6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms