Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.33□□□□□ -1.08
TRIM47Q96LD4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.33□□□□□ -1.08
TRIM47Q96LD4 MTND5P26-201ENST00000426018 1752 ntBASIC8.33□□□□□ -1.08
TRIM47Q96LD4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC006116.1-201ENST00000587908 2171 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 SNORA68-201ENST00000384437 133 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC019178.1-201ENST00000392337 440 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AL079341.1-201ENST00000404701 1207 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LARP1P1-201ENST00000407692 292 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 Z68694.1-201ENST00000413929 841 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 HIGD1AP12-201ENST00000427832 281 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 MOB1AP1-201ENST00000430903 535 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 GAPDHP19-201ENST00000431768 1005 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC112492.2-201ENST00000432774 1030 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 GTF3AP5-201ENST00000442645 697 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 RPL6P5-201ENST00000445678 828 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC233982.1-201ENST00000451247 436 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 HMGB1P5-202ENST00000451497 985 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 RN7SL83P-201ENST00000468131 297 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 RN7SL568P-201ENST00000493069 298 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 DCAF13P2-201ENST00000514188 555 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AP001207.1-201ENST00000524051 481 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 OR11J2P-201ENST00000555298 907 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC135626.1-201ENST00000556983 435 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC015917.1-201ENST00000579654 510 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC005242.1-201ENST00000585658 438 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC073569.3-201ENST00000619055 682 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AL161420.1-201ENST00000619393 264 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 ZNF969P-201ENST00000510345 2341 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 AC018688.1-201ENST00000636528 1754 ntBASIC8.32□□□□□ -1.08
TRIM47Q96LD4 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRIM47Q96LD4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC011447.6-201ENST00000623510 2598 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 IFIT1P1-201ENST00000400497 1449 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 MTCO1P23-201ENST00000415223 1526 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 FRG1BP-201ENST00000278882 761 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 FRG1CP-201ENST00000358464 769 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RN7SKP55-201ENST00000364888 307 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 SUMO2P13-201ENST00000403109 272 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 MIR1282-201ENST00000408865 101 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RNU4-74P-201ENST00000411280 161 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL445183.3-201ENST00000414168 502 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 THEM7P-201ENST00000419556 672 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 MTCO3P21-201ENST00000430791 643 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC069154.1-201ENST00000432914 542 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC013410.1-201ENST00000436223 1232 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms