Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHAMP1Q96JM3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHAMP1Q96JM3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CHAMP1Q96JM3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CHAMP1Q96JM3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 KYNUP3-201ENST00000574386 1341 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MIR365B-201ENST00000362317 111 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC234772.1-201ENST00000377927 937 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 SEPT7P8-201ENST00000413308 775 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 Z93019.1-201ENST00000416450 973 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 VN1R42P-201ENST00000424651 344 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MED6P1-201ENST00000439659 713 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 RN7SL83P-201ENST00000468131 297 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 RPS17P11-201ENST00000474297 293 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC124945.1-201ENST00000485133 188 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 RPL7P51-201ENST00000490532 749 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 IGHV4-55-201ENST00000520889 368 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 KCTD9P6-201ENST00000522306 950 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 OR6M2P-201ENST00000529831 871 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 OSBPL9P5-201ENST00000542581 171 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MTCYBP23-201ENST00000558717 1102 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AL356801.1-201ENST00000559320 294 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC026826.3-201ENST00000561747 158 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC009097.3-201ENST00000563557 1018 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 Z94722.1-201ENST00000604328 474 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 AC006927.2-201ENST00000639256 389 ntBASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.07□□□□□ -1.28
CHAMP1Q96JM3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AL355578.1-201ENST00000607405 1328 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC217777.1-201ENST00000570034 1471 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 KARSP1-201ENST00000451871 1752 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RNU5B-4P-201ENST00000363508 111 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RNA5SP346-201ENST00000363541 121 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RNU6-207P-201ENST00000384137 107 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AL096800.1-201ENST00000405326 893 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 UBE2V1P9-201ENST00000414760 368 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 RPL22P18-201ENST00000417197 377 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 MTCYBP7-201ENST00000419540 1134 ntBASIC7.06□□□□□ -1.28
CHAMP1Q96JM3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms