Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 SNORD113-6-201ENST00000363345 75 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 RNU6-1251P-201ENST00000364502 107 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL451142.1-201ENST00000375867 775 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MRPS6P2-201ENST00000381143 370 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 OR7E156P-201ENST00000400303 464 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MTND4P3-201ENST00000417829 541 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 DPPA2P2-201ENST00000418220 897 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MTND4P6-201ENST00000438297 472 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL445567.1-201ENST00000439121 144 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 COL11A2P1-205ENST00000441798 676 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC005410.1-202ENST00000460347 485 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC093719.1-201ENST00000480427 441 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC092824.1-201ENST00000483524 576 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 SNRPCP11-201ENST00000492453 205 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC093870.1-201ENST00000506837 213 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC074087.1-201ENST00000512059 724 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC008494.2-201ENST00000514544 370 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC117532.1-201ENST00000514638 323 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 NDUFS5P6-201ENST00000529136 295 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC092718.4-201ENST00000566639 716 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MIR4789-201ENST00000577469 82 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 RBM22P1-201ENST00000578589 1214 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC103987.3-201ENST00000582071 292 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 MTND3P19-201ENST00000603825 345 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 LSM1P2-201ENST00000604911 322 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL390877.1-201ENST00000605704 214 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 VIS1.1-201ENST00000610517 203 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL136097.3-201ENST00000611097 505 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 U1.41-201ENST00000617626 165 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC067852.7-201ENST00000623270 535 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AC103706.2-201ENST00000638080 240 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 AP002370.1-201ENST00000528055 1602 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.69□□□□□ -1.5
CPEB3Q8NE35 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.69□□□□□ -1.5
CPEB3Q8NE35 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC010624.4-201ENST00000597606 1351 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RNA5SP512-201ENST00000364550 120 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL391422.1-201ENST00000402155 436 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 GSTA12P-201ENST00000402398 508 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RPL7P27-201ENST00000403775 720 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL023284.3-201ENST00000407767 334 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms