Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL645931.1-201ENST00000439737 410 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RAB9AP2-201ENST00000443911 597 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC023245.1-201ENST00000468501 517 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC117395.1-201ENST00000487390 403 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AK4P6-201ENST00000505168 528 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RNU6-615P-201ENST00000516065 106 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC087763.1-201ENST00000603391 286 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 MIR378J-201ENST00000611988 109 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 PCA3_2.1-201ENST00000612507 409 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AL445528.2-201ENST00000620582 470 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC120057.5-201ENST00000623840 154 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 CCAT2-201ENST00000630920 1752 ntBASIC7.21□□□□□ -1.25
SMC1BQ8NDV3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL096829.1-201ENST00000413677 457 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 CYCSP52-201ENST00000422857 310 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 DUTP4-201ENST00000424782 475 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC091390.1-201ENST00000433904 331 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 BZW1P1-201ENST00000454901 1240 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL022319.1-201ENST00000458183 1167 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 RPS23P6-201ENST00000466136 431 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 RN7SL583P-201ENST00000475692 287 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 STRADBP1-201ENST00000478954 1281 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 FTH1P8-201ENST00000498161 514 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 OR9L1P-201ENST00000529493 933 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 YWHAZP1-201ENST00000556286 722 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 NPM1P5-201ENST00000557228 838 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC096996.1-201ENST00000563813 325 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 RPL10P14-201ENST00000565265 298 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC068620.3-201ENST00000602749 560 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AL139384.2-201ENST00000613809 3590 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 FBXL21-201ENST00000297158 1305 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC112255.1-201ENST00000624070 2493 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms