Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AP000926.3-201ENST00000497201 299 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC098976.1-201ENST00000513014 541 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 PRMT5P1-201ENST00000514351 598 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC130364.2-201ENST00000528639 604 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 MIR3157-201ENST00000578688 85 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AL137072.1-201ENST00000603444 466 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC008833.1-201ENST00000611633 691 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC010325.3-201ENST00000641084 394 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC003985.2-201ENST00000562268 1669 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 TRIM51GP-201ENST00000534741 1350 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AL359715.3-201ENST00000569267 2123 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 PCAT14-202ENST00000627127 3935 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 SNORA48.4-201ENST00000391089 134 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 ARSFP1-201ENST00000398758 477 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 NIFKP3-201ENST00000417799 865 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RPL7P56-201ENST00000429441 717 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC010240.2-201ENST00000445363 1205 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 OR52E3P-201ENST00000452083 936 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC019084.1-201ENST00000457337 432 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC020779.1-201ENST00000478757 796 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RPS4XP17-201ENST00000479057 754 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RN7SL570P-201ENST00000484405 292 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC011411.1-201ENST00000509592 876 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC009879.1-201ENST00000520029 839 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RN7SL290P-201ENST00000578661 300 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RN7SL657P-201ENST00000582431 293 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 U91328.4-201ENST00000608919 517 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC096586.2-201ENST00000610260 441 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC026367.3-201ENST00000619032 590 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AC211486.4-201ENST00000621495 113 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 FRG1EP-201ENST00000634469 770 ntBASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71LQ8N9Z2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 TCP1P3-201ENST00000414406 1498 ntBASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC71LQ8N9Z2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms