Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 MTND4LP24-201ENST00000572277 291 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC022069.1-201ENST00000582910 658 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC107982.3-201ENST00000584957 985 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC005034.4-201ENST00000603612 899 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 MIR6085-201ENST00000618314 110 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC022079.2-201ENST00000619739 566 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 TSHZ2-205ENST00000626626 670 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 BX322650.1-201ENST00000332359 2143 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 BX005019.1-201ENST00000561881 1810 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AP005139.1-201ENST00000580702 1647 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 AC093225.1-201ENST00000506867 1408 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TMEFF1Q8IYR6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AP002364.1-201ENST00000623330 3386 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 MTND5P24-201ENST00000438892 1767 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 ANKRD36P1-201ENST00000344424 659 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 Y_RNA.3-201ENST00000362331 103 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 ELOCP9-201ENST00000418624 239 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC019178.2-201ENST00000423595 505 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 ARL5AP3-201ENST00000439327 386 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC092393.1-201ENST00000439625 742 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 EEF1A1P39-201ENST00000440791 250 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL391987.1-201ENST00000441025 200 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 MTND5P2-201ENST00000442927 1142 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC084754.1-201ENST00000463466 464 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 RPL21P47-201ENST00000483696 477 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 RNA5SP206-201ENST00000516703 121 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 NANOGNBP2-201ENST00000544753 553 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC025918.2-201ENST00000558683 763 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CYCSP38-201ENST00000559840 322 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 MIR3614-201ENST00000581261 86 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC008521.2-201ENST00000591021 259 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL163642.2-201ENST00000604722 1019 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC012409.3-201ENST00000611343 981 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC105227.2-201ENST00000615075 605 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC010975.3-201ENST00000618727 978 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 AC034229.6-201ENST00000623704 224 ntBASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.49□□□□□ -1.37
TMEFF1Q8IYR6 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms