Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 PARP4P2-201ENST00000446672 3326 ntBASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
PPARGC1BQ86YN6 AC024651.2-201ENST00000562480 2098 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 Y_RNA.436-201ENST00000384097 102 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AL139039.2-201ENST00000407436 479 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 TRIM60P5Y-201ENST00000413946 574 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 RPS3AP44-201ENST00000425466 790 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AL590399.2-201ENST00000427536 309 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC002553.3-201ENST00000453002 341 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AL355032.1-201ENST00000472981 438 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 LAMTOR3P2-201ENST00000504479 232 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC108103.1-201ENST00000511286 446 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AP003355.1-201ENST00000518956 587 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC104997.1-201ENST00000519761 717 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 TPM3P3-201ENST00000521343 354 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC106730.2-201ENST00000566641 540 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 MIR132-201ENST00000591554 101 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AL450270.1-201ENST00000606160 391 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 SNORA74.4-201ENST00000607595 199 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC078880.5-201ENST00000617845 421 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC073592.6-201ENST00000624271 415 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 RBMY1HP-201ENST00000382759 1389 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 MTND4P26-201ENST00000415971 1359 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 AC083837.1-201ENST00000565297 2994 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 MSL3P1-202ENST00000440028 1468 ntBASIC9.47□□□□□ -0.89
PPARGC1BQ86YN6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 LYARP1-201ENST00000436977 1501 ntBASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 SHQ1P1-201ENST00000437111 1544 ntBASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 CASC19-260ENST00000641828 2001 ntBASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.46□□□□□ -0.89
PPARGC1BQ86YN6 AC011933.2-201ENST00000578539 2790 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 SNRPEP6-201ENST00000407465 277 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC015977.1-201ENST00000418887 292 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC013268.2-201ENST00000420753 337 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 GSTA7P-201ENST00000438425 448 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 RPL5P7-201ENST00000444235 813 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 Z73417.1-201ENST00000447373 778 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 NPM1P19-201ENST00000450070 712 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 MTCO3P16-201ENST00000454456 754 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 RN7SL254P-201ENST00000460609 284 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 RN7SL168P-201ENST00000463821 279 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 RN7SL170P-201ENST00000487098 295 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 IGLV3-30-201ENST00000524362 298 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC006512.2-201ENST00000543250 486 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 NDUFAF4P1-201ENST00000559425 519 ntBASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC9.46□□□□□ -0.9
PPARGC1BQ86YN6 AC090826.1-203ENST00000569235 490 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms