Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 CASC19-205ENST00000641013 1411 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 MFSD8-239ENST00000641590 2479 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 RNA5SP479-201ENST00000364858 117 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 HSPD1P12-201ENST00000429127 1069 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AL603882.1-201ENST00000463059 681 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC009127.1-201ENST00000467090 155 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 DUTP1-201ENST00000493631 470 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC111000.3-201ENST00000508057 576 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC105384.2-201ENST00000508433 640 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC011487.3-201ENST00000593607 453 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC073575.2-201ENST00000614212 627 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AL133243.4-201ENST00000623116 3109 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 SNORA37-201ENST00000384504 129 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AL451062.2-201ENST00000427515 271 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 RPS27AP3-201ENST00000453803 454 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 GCSHP4-201ENST00000538792 439 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC127381.1-201ENST00000555979 939 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC009597.2-201ENST00000604659 592 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AL034374.2-201ENST00000605281 548 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC024589.2-201ENST00000605642 1294 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC005962.2-201ENST00000611427 652 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 AC067931.1-201ENST00000624190 671 ntBASIC4.78□□□□□ -1.64
LRRK2Q5S007 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRK2Q5S007 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LRRK2Q5S007 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC006946.1-201ENST00000429106 328 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 FTH1P25-201ENST00000447665 469 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC125494.2-201ENST00000602431 657 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC020765.1-201ENST00000604296 328 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRK2Q5S007 AC104118.1-201ENST00000607625 1589 ntBASIC4.77□□□□□ -1.65
LRRK2Q5S007 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRK2Q5S007 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms