Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC010486.2-201ENST00000505572 483 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 ZNF519P4-201ENST00000514008 125 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 IGHV3-57-201ENST00000520143 280 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC005363.1-201ENST00000530779 351 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 OR5AM1P-201ENST00000532136 1032 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC006512.2-201ENST00000543250 486 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC005244.1-201ENST00000582566 339 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC002069.2-201ENST00000603580 883 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 MTND3P19-201ENST00000603825 345 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC073046.2-201ENST00000604756 527 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AC007342.8-201ENST00000623278 678 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 AL121594.5-201ENST00000631724 573 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 IFIT1P1-201ENST00000400497 1449 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 PARP4P1-201ENST00000435945 2337 ntBASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
FNDC3BQ53EP0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL359976.1-201ENST00000418655 3528 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AKAP17BP-201ENST00000431706 2719 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC125238.2-201ENST00000430003 1440 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 RNU6-549P-201ENST00000384433 107 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 GCNT1P4-201ENST00000404096 329 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL008987.1-201ENST00000415528 237 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL356320.2-201ENST00000417263 507 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC002542.1-201ENST00000440683 193 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AL645936.1-201ENST00000441979 518 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 HMGB1P7-201ENST00000450921 612 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 USP9YP25-201ENST00000457708 443 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 RNU7-140P-201ENST00000459546 60 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AP002453.1-201ENST00000492327 668 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC117522.2-201ENST00000510049 657 ntBASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.54□□□□□ -1.36
FNDC3BQ53EP0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms