Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 COX6B1P3-201ENST00000312310 260 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 OR9K1P-201ENST00000326513 941 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MIR1275-201ENST00000408770 80 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 RNF10P1-201ENST00000418589 369 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 TMEM183AP1-205ENST00000432739 290 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PNKDP1-201ENST00000435914 430 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC002553.2-201ENST00000453217 340 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC135999.1-201ENST00000478962 479 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 DUTP1-201ENST00000493631 470 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC122718.2-201ENST00000505325 591 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC091874.2-201ENST00000505889 720 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 SCARNA18.1-201ENST00000516330 83 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 OR4A17P-201ENST00000526032 904 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AL845552.1-201ENST00000556820 323 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MIR4260-201ENST00000583107 67 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC108673.3-201ENST00000609183 335 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC015660.5-201ENST00000623238 564 ntBASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H1AQ02539 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 PDZK1P1-202ENST00000425209 1350 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RNFT1P3-201ENST00000340898 1052 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RN7SKP171-201ENST00000364417 303 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 RN7SKP29-201ENST00000410957 272 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AC009784.1-201ENST00000426484 460 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 CLNS1AP1-201ENST00000435954 682 ntBASIC4.29□□□□□ -1.72
HIST1H1AQ02539 AMYP1-201ENST00000440059 1023 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms