Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL669831.5-218ENST00000591702 1873 ntBASIC4.68□□□□□ -1.66
LMO4P61968 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LMO4P61968 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMO4P61968 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
LMO4P61968 NAMPTP1-201ENST00000440465 2514 ntBASIC4.68□□□□□ -1.66
LMO4P61968 AC022164.1-201ENST00000568767 2673 ntBASIC4.68□□□□□ -1.66
LMO4P61968 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
LMO4P61968 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMO4P61968 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 MIR1286-201ENST00000408112 78 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AP000534.2-201ENST00000412729 568 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AL356968.2-201ENST00000412769 1257 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 VN1R21P-201ENST00000426703 765 ntBASIC4.67□□□□□ -1.66
LMO4P61968 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 LDHAP2-201ENST00000437325 985 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 OR2AO1P-201ENST00000476497 403 ntBASIC4.67□□□□□ -1.66
LMO4P61968 UBA52P7-201ENST00000486088 380 ntBASIC4.67□□□□□ -1.66
LMO4P61968 FTH1P8-201ENST00000498161 514 ntBASIC4.67□□□□□ -1.66
LMO4P61968 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 RN7SKP157-201ENST00000516174 282 ntBASIC4.67□□□□□ -1.66
LMO4P61968 MTND1P6-201ENST00000523621 946 ntBASIC4.67□□□□□ -1.66
LMO4P61968 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.67□□□□□ -1.66
LMO4P61968 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 MTND1P8-201ENST00000571424 950 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.67□□□□□ -1.66
LMO4P61968 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 NANOGP3-201ENST00000605855 286 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AC005899.7-201ENST00000618199 588 ntBASIC4.67□□□□□ -1.66
LMO4P61968 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 MIR6837-201ENST00000620884 64 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AC004808.2-201ENST00000627965 773 ntBASIC4.67□□□□□ -1.66
LMO4P61968 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 CASC19-264ENST00000641912 1184 ntBASIC4.67□□□□□ -1.66
LMO4P61968 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.67□□□□□ -1.66
LMO4P61968 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
LMO4P61968 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.67□□□□□ -1.66
LMO4P61968 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMO4P61968 HSPD1P8-201ENST00000400121 1658 ntBASIC4.67□□□□□ -1.66
LMO4P61968 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.67□□□□□ -1.66
LMO4P61968 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMO4P61968 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 AC087516.1-201ENST00000561236 2428 ntBASIC4.66□□□□□ -1.66
LMO4P61968 PWAR1-201ENST00000624188 2414 ntBASIC4.66□□□□□ -1.66
LMO4P61968 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMO4P61968 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LMO4P61968 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 AL137141.1-201ENST00000624622 4836 ntBASIC4.66□□□□□ -1.66
LMO4P61968 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
LMO4P61968 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.66□□□□□ -1.66
LMO4P61968 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LMO4P61968 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms