Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH4P55283 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH4P55283 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH4P55283 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH4P55283 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 MIR323B-201ENST00000385269 82 ntBASIC5.69□□□□□ -1.5
CDH4P55283 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 AC079355.1-201ENST00000421770 223 ntBASIC5.69□□□□□ -1.5
CDH4P55283 RIMKLBP2-201ENST00000424737 654 ntBASIC5.69□□□□□ -1.5
CDH4P55283 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 AC092106.1-201ENST00000444291 373 ntBASIC5.69□□□□□ -1.5
CDH4P55283 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH4P55283 OR2AF1P-201ENST00000454899 889 ntBASIC5.69□□□□□ -1.5
CDH4P55283 RN7SL51P-201ENST00000468230 285 ntBASIC5.69□□□□□ -1.5
CDH4P55283 RPL35AP19-201ENST00000469425 329 ntBASIC5.69□□□□□ -1.5
CDH4P55283 EIF1P7-201ENST00000487533 337 ntBASIC5.69□□□□□ -1.5
CDH4P55283 AC090638.1-201ENST00000498296 909 ntBASIC5.69□□□□□ -1.5
CDH4P55283 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 AC111000.5-201ENST00000506559 1178 ntBASIC5.69□□□□□ -1.5
CDH4P55283 RPL7L1P4-201ENST00000513004 707 ntBASIC5.69□□□□□ -1.5
CDH4P55283 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH4P55283 OR5AM1P-201ENST00000532136 1032 ntBASIC5.69□□□□□ -1.5
CDH4P55283 HNRNPCP1-201ENST00000556181 766 ntBASIC5.69□□□□□ -1.5
CDH4P55283 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 AC090286.3-201ENST00000573133 187 ntBASIC5.69□□□□□ -1.5
CDH4P55283 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 RN7SL753P-201ENST00000581238 290 ntBASIC5.69□□□□□ -1.5
CDH4P55283 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.69□□□□□ -1.5
CDH4P55283 MIR8080-201ENST00000622224 89 ntBASIC5.69□□□□□ -1.5
CDH4P55283 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH4P55283 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 AC068870.1-201ENST00000563737 2455 ntBASIC5.69□□□□□ -1.5
CDH4P55283 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH4P55283 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
CDH4P55283 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH4P55283 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 RNA5SP234-201ENST00000363916 119 ntBASIC5.68□□□□□ -1.5
CDH4P55283 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH4P55283 RN7SKP17-201ENST00000411242 351 ntBASIC5.68□□□□□ -1.5
CDH4P55283 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH4P55283 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH4P55283 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
CDH4P55283 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH4P55283 RANP1-206ENST00000455094 651 ntBASIC5.68□□□□□ -1.5
CDH4P55283 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH4P55283 RN7SL583P-201ENST00000475692 287 ntBASIC5.68□□□□□ -1.5
CDH4P55283 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH4P55283 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH4P55283 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH4P55283 RN7SKP99-201ENST00000517028 307 ntBASIC5.68□□□□□ -1.5
CDH4P55283 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.68□□□□□ -1.5
CDH4P55283 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
CDH4P55283 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH4P55283 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH4P55283 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH4P55283 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH4P55283 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
CDH4P55283 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH4P55283 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CDH4P55283 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 MSL3P1-202ENST00000440028 1468 ntBASIC5.67□□□□□ -1.5
CDH4P55283 RN7SKP160-201ENST00000363804 340 ntBASIC5.67□□□□□ -1.5
CDH4P55283 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH4P55283 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 AC073072.2-201ENST00000447425 348 ntBASIC5.67□□□□□ -1.5
CDH4P55283 IGBP1P3-201ENST00000447449 1000 ntBASIC5.67□□□□□ -1.5
CDH4P55283 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH4P55283 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH4P55283 RN7SL184P-201ENST00000488308 297 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC108693.1-201ENST00000496068 432 ntBASIC5.67□□□□□ -1.5
CDH4P55283 GOLGA5P1-201ENST00000507317 980 ntBASIC5.67□□□□□ -1.5
CDH4P55283 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms