Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC239868.2-201ENST00000564237 4527 ntBASIC6.23□□□□□ -1.41
GPC3P51654 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
GPC3P51654 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GPC3P51654 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GPC3P51654 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GPC3P51654 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
GPC3P51654 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GPC3P51654 MIR1178-201ENST00000408396 91 ntBASIC6.22□□□□□ -1.41
GPC3P51654 GABARAPL3-201ENST00000412799 354 ntBASIC6.22□□□□□ -1.41
GPC3P51654 BMS1P13-201ENST00000417301 885 ntBASIC6.22□□□□□ -1.41
GPC3P51654 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.22□□□□□ -1.41
GPC3P51654 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 CFL1P1-202ENST00000432948 411 ntBASIC6.22□□□□□ -1.41
GPC3P51654 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.22□□□□□ -1.41
GPC3P51654 AC019185.1-201ENST00000442718 389 ntBASIC6.22□□□□□ -1.41
GPC3P51654 VDAC2P4-201ENST00000452925 711 ntBASIC6.22□□□□□ -1.41
GPC3P51654 AC100832.1-201ENST00000471945 383 ntBASIC6.22□□□□□ -1.41
GPC3P51654 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.22□□□□□ -1.41
GPC3P51654 KCTD9P6-201ENST00000522306 950 ntBASIC6.22□□□□□ -1.41
GPC3P51654 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.22□□□□□ -1.41
GPC3P51654 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.22□□□□□ -1.41
GPC3P51654 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 NPM1P45-201ENST00000583151 559 ntBASIC6.22□□□□□ -1.41
GPC3P51654 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 AP001357.1-201ENST00000586304 1053 ntBASIC6.22□□□□□ -1.41
GPC3P51654 AL359513.1-201ENST00000614364 557 ntBASIC6.22□□□□□ -1.41
GPC3P51654 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
GPC3P51654 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GPC3P51654 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.22□□□□□ -1.41
GPC3P51654 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
GPC3P51654 AC093671.1-201ENST00000624981 2929 ntBASIC6.22□□□□□ -1.41
GPC3P51654 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.41
GPC3P51654 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
GPC3P51654 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
GPC3P51654 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.21□□□□□ -1.41
GPC3P51654 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
GPC3P51654 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 RN7SKP59-201ENST00000410520 314 ntBASIC6.21□□□□□ -1.42
GPC3P51654 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.21□□□□□ -1.42
GPC3P51654 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.21□□□□□ -1.42
GPC3P51654 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.21□□□□□ -1.42
GPC3P51654 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.21□□□□□ -1.42
GPC3P51654 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.21□□□□□ -1.42
GPC3P51654 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.21□□□□□ -1.42
GPC3P51654 MEMO1P4-201ENST00000453590 386 ntBASIC6.21□□□□□ -1.42
GPC3P51654 AC011225.1-201ENST00000457751 369 ntBASIC6.21□□□□□ -1.42
GPC3P51654 EIF1P7-201ENST00000487533 337 ntBASIC6.21□□□□□ -1.42
GPC3P51654 BX510359.5-201ENST00000515651 304 ntBASIC6.21□□□□□ -1.42
GPC3P51654 IGLV3-24-201ENST00000517477 197 ntBASIC6.21□□□□□ -1.42
GPC3P51654 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.21□□□□□ -1.42
GPC3P51654 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 NPM1P5-201ENST00000557228 838 ntBASIC6.21□□□□□ -1.42
GPC3P51654 AGGF1P7-201ENST00000562369 913 ntBASIC6.21□□□□□ -1.42
GPC3P51654 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.21□□□□□ -1.42
GPC3P51654 AC010547.7-201ENST00000570323 333 ntBASIC6.21□□□□□ -1.42
GPC3P51654 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.21□□□□□ -1.42
GPC3P51654 IMMP1LP3-201ENST00000604197 224 ntBASIC6.21□□□□□ -1.42
GPC3P51654 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.21□□□□□ -1.42
GPC3P51654 AC010245.2-201ENST00000606908 1167 ntBASIC6.21□□□□□ -1.42
GPC3P51654 MIR8080-201ENST00000622224 89 ntBASIC6.21□□□□□ -1.42
GPC3P51654 AC009950.2-201ENST00000636548 183 ntBASIC6.21□□□□□ -1.42
GPC3P51654 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
GPC3P51654 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.21□□□□□ -1.42
GPC3P51654 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 AC125336.1-201ENST00000508893 2827 ntBASIC6.21□□□□□ -1.42
GPC3P51654 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
GPC3P51654 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GPC3P51654 AC009962.1-201ENST00000567327 3813 ntBASIC6.2□□□□□ -1.42
GPC3P51654 AL034546.1-201ENST00000623740 3693 ntBASIC6.2□□□□□ -1.42
GPC3P51654 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GPC3P51654 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms