Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 MAPK10-328ENST00000641553 4009 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 U3.7-201ENST00000363668 216 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 RNA5SP30-201ENST00000365552 115 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AL022331.1-201ENST00000429025 477 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CR1P49238 SNRPFP2-201ENST00000440710 251 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 SEPT7P3-201ENST00000455017 621 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.91□□□□□ -1.62
CX3CR1P49238 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 IGLV3-24-201ENST00000517477 197 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 OR4A17P-201ENST00000526032 904 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AP000648.1-201ENST00000529682 397 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
CX3CR1P49238 HSPE1P2-201ENST00000554777 306 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AL031601.1-201ENST00000605702 394 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AC009779.8-202ENST00000607990 932 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AC022960.2-201ENST00000616300 666 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AL589935.2-201ENST00000616471 1231 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 AL390318.1-201ENST00000624564 687 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC144833.1-201ENST00000567953 4089 ntBASIC4.91□□□□□ -1.62
CX3CR1P49238 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CR1P49238 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CR1P49238 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CR1P49238 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CX3CR1P49238 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.62
CX3CR1P49238 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.9□□□□□ -1.62
CX3CR1P49238 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.9□□□□□ -1.62
CX3CR1P49238 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 MTND5P23-201ENST00000430812 1655 ntBASIC4.9□□□□□ -1.62
CX3CR1P49238 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.9□□□□□ -1.62
CX3CR1P49238 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CR1P49238 GAPDHP24-201ENST00000328713 983 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CX3CR1P49238 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CX3CR1P49238 RNA5SP433-201ENST00000364491 114 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AL133482.1-201ENST00000415988 498 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 NENFP1-201ENST00000419476 466 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CR1P49238 HMGB3P24-201ENST00000433260 622 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 FTLP19-201ENST00000433300 394 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AL359265.1-201ENST00000440296 795 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 ARAFP2-201ENST00000440565 559 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 CYCSP51-201ENST00000443545 318 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 AL359839.1-201ENST00000451975 1160 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AC019084.1-201ENST00000457337 432 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 PSAT1P4-201ENST00000466500 526 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AC016687.1-201ENST00000482574 353 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 RN7SL170P-201ENST00000487098 295 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CR1P49238 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 RN7SKP253-201ENST00000516424 309 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 SNORA70.20-201ENST00000516848 126 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AC060775.1-201ENST00000518241 520 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CR1P49238 EIF4EP5-201ENST00000528228 640 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CR1P49238 OR5AM1P-201ENST00000532136 1032 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CR1P49238 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CX3CR1P49238 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CR1P49238 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms