Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TOMM20P1-201ENST00000534518 427 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCD3P28288 AC007494.1-201ENST00000562293 760 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AC106785.3-201ENST00000564064 847 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCD3P28288 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCD3P28288 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCD3P28288 AF230666.2-201ENST00000602328 725 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AL360012.1-201ENST00000602813 131 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 MTATP6P2-201ENST00000603319 678 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AC079880.2-201ENST00000603790 1213 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AL049844.2-201ENST00000604280 628 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AL499605.1-201ENST00000604628 403 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ABCD3P28288 MIR6071-201ENST00000616741 78 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCD3P28288 AL357562.1-201ENST00000624911 609 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ABCD3P28288 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ABCD3P28288 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
ABCD3P28288 AC016583.1-201ENST00000624221 2431 ntBASIC5.58□□□□□ -1.52
ABCD3P28288 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ABCD3P28288 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ABCD3P28288 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.58□□□□□ -1.52
ABCD3P28288 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCD3P28288 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
ABCD3P28288 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.57□□□□□ -1.52
ABCD3P28288 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 ATP5F1P6-201ENST00000402768 767 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 SNORA77.2-201ENST00000408571 112 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 RNA5SP498-201ENST00000411342 120 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 AC022022.1-201ENST00000430304 178 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.57□□□□□ -1.52
ABCD3P28288 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 MOB1AP2-201ENST00000446060 614 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 CLIC4P1-201ENST00000453177 535 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AL133244.1-201ENST00000456007 258 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 LDHBP2-201ENST00000456969 1005 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 AC092865.4-201ENST00000477936 615 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC107398.1-201ENST00000486904 505 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 RPL23AP40-201ENST00000487630 390 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 LSM3P4-201ENST00000502948 309 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 AP003396.4-201ENST00000527574 265 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 UBTFL9-201ENST00000534504 1148 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AP002373.2-201ENST00000541631 1060 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AP000619.2-201ENST00000546014 969 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.57□□□□□ -1.52
ABCD3P28288 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 AC119403.2-201ENST00000590960 598 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC004890.3-201ENST00000605566 1095 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC245014.3-201ENST00000618589 347 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ABCD3P28288 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCD3P28288 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 WDR95P-201ENST00000425638 1542 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 PSG10P-201ENST00000501199 1500 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC232271.1-201ENST00000602455 2715 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCD3P28288 NLRP3P1-201ENST00000622303 1785 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 AC140134.1-201ENST00000511830 3544 ntBASIC5.57□□□□□ -1.52
ABCD3P28288 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
ABCD3P28288 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms