Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TOP1P11387 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.53□□□□□ -1.36
TOP1P11387 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
TOP1P11387 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
TOP1P11387 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.52□□□□□ -1.37
TOP1P11387 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 RNA5SP319-201ENST00000362768 119 ntBASIC6.52□□□□□ -1.37
TOP1P11387 RNA5SP234-201ENST00000363916 119 ntBASIC6.52□□□□□ -1.37
TOP1P11387 MIR551A-201ENST00000385042 96 ntBASIC6.52□□□□□ -1.37
TOP1P11387 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TOP1P11387 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 GABARAPL3-201ENST00000412799 354 ntBASIC6.52□□□□□ -1.37
TOP1P11387 AL158827.1-201ENST00000416300 391 ntBASIC6.52□□□□□ -1.37
TOP1P11387 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP1P11387 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.52□□□□□ -1.37
TOP1P11387 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP1P11387 AC100832.1-201ENST00000471945 383 ntBASIC6.52□□□□□ -1.37
TOP1P11387 EIF1P7-201ENST00000487533 337 ntBASIC6.52□□□□□ -1.37
TOP1P11387 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.52□□□□□ -1.37
TOP1P11387 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.52□□□□□ -1.37
TOP1P11387 RN7SKP253-201ENST00000516424 309 ntBASIC6.52□□□□□ -1.37
TOP1P11387 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP1P11387 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP1P11387 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.52□□□□□ -1.37
TOP1P11387 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.52□□□□□ -1.37
TOP1P11387 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 MIR8080-201ENST00000622224 89 ntBASIC6.52□□□□□ -1.37
TOP1P11387 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TOP1P11387 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TOP1P11387 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 AC109446.4-201ENST00000623235 2755 ntBASIC6.51□□□□□ -1.37
TOP1P11387 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 RN7SKP6-201ENST00000364795 319 ntBASIC6.51□□□□□ -1.37
TOP1P11387 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP1P11387 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.51□□□□□ -1.37
TOP1P11387 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.51□□□□□ -1.37
TOP1P11387 SPRYD7P1-201ENST00000443861 570 ntBASIC6.51□□□□□ -1.37
TOP1P11387 SIAH1P1-201ENST00000479411 923 ntBASIC6.51□□□□□ -1.37
TOP1P11387 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 ATP5LP5-201ENST00000483050 299 ntBASIC6.51□□□□□ -1.37
TOP1P11387 RN7SL547P-201ENST00000490793 290 ntBASIC6.51□□□□□ -1.37
TOP1P11387 AC090638.1-201ENST00000498296 909 ntBASIC6.51□□□□□ -1.37
TOP1P11387 GOLGA5P1-201ENST00000507317 980 ntBASIC6.51□□□□□ -1.37
TOP1P11387 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.51□□□□□ -1.37
TOP1P11387 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.51□□□□□ -1.37
TOP1P11387 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 MIR4433B-201ENST00000581329 102 ntBASIC6.51□□□□□ -1.37
TOP1P11387 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.51□□□□□ -1.37
TOP1P11387 AL583832.1-201ENST00000603227 784 ntBASIC6.51□□□□□ -1.37
TOP1P11387 AP000864.1-201ENST00000609424 650 ntBASIC6.51□□□□□ -1.37
TOP1P11387 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.51□□□□□ -1.37
TOP1P11387 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 MT-RNR2-201ENST00000387347 1559 ntBASIC6.51□□□□□ -1.37
TOP1P11387 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
TOP1P11387 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TOP1P11387 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TOP1P11387 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
TOP1P11387 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.5□□□□□ -1.37
TOP1P11387 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.5□□□□□ -1.37
TOP1P11387 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TOP1P11387 AL121886.1-201ENST00000358609 435 ntBASIC6.5□□□□□ -1.37
TOP1P11387 RN7SKP162-201ENST00000363605 345 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms