Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.2□□□□□ -1.74
CXCL1P09341 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.2□□□□□ -1.74
CXCL1P09341 AL671862.1-201ENST00000515851 349 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 RN7SKP46-201ENST00000515942 234 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 PMS2P3-207ENST00000529061 717 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CXCL1P09341 AP004607.5-201ENST00000532034 217 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.2□□□□□ -1.74
CXCL1P09341 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.2□□□□□ -1.74
CXCL1P09341 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.2□□□□□ -1.74
CXCL1P09341 MIR3157-201ENST00000578688 85 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL1P09341 AC087283.1-201ENST00000604029 1074 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 FAM27E2-201ENST00000619668 403 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 AC010325.3-201ENST00000641084 394 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 UGT2B26P-201ENST00000508672 1613 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 SAMMSON-213ENST00000641336 1521 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 LINC01355-201ENST00000566551 5444 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXCL1P09341 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SKP77-201ENST00000363261 353 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXCL1P09341 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXCL1P09341 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXCL1P09341 ARSFP1-201ENST00000398758 477 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SKP125-201ENST00000410481 302 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 E2F6P2-201ENST00000420708 748 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL1P09341 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 AC099782.1-201ENST00000425889 474 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AC104843.2-201ENST00000427666 297 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL1P09341 TUBB4BP6-201ENST00000437576 479 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL1P09341 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC063955.1-201ENST00000462872 685 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC112206.1-201ENST00000468416 477 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 RPS12P31-201ENST00000491419 398 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 ZNF519P4-201ENST00000514008 125 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL1P09341 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC131935.1-201ENST00000524621 333 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AGGF1P7-201ENST00000562369 913 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 LINC00556-201ENST00000569603 412 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 MIR4260-201ENST00000583107 67 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 H3F3BP2-201ENST00000583907 357 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SL52P-201ENST00000584271 284 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.19□□□□□ -1.74
CXCL1P09341 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC011891.2-201ENST00000604949 397 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.19□□□□□ -1.74
CXCL1P09341 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SL787P-201ENST00000613000 284 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AL021918.2-201ENST00000613415 194 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SL544P-201ENST00000617232 284 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 BX005214.3-202ENST00000619809 325 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 RN7SL763P-201ENST00000620922 284 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 AC211486.4-201ENST00000621495 113 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 SALL4P2-201ENST00000423288 2910 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXCL1P09341 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.19□□□□□ -1.74
CXCL1P09341 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
CXCL1P09341 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CXCL1P09341 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXCL1P09341 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms