Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA1P02708 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA1P02708 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CHRNA1P02708 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA1P02708 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA1P02708 RPL23P2-201ENST00000320371 421 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.09□□□□□ -1.43
CHRNA1P02708 SNORD1C-201ENST00000363315 78 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.09□□□□□ -1.43
CHRNA1P02708 RNA5SP339-201ENST00000390987 122 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.09□□□□□ -1.43
CHRNA1P02708 RPS27P18-201ENST00000431701 247 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 RPS3AP38-201ENST00000435889 763 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 AL161722.1-201ENST00000446972 1032 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 AC105399.1-202ENST00000447303 205 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 SUMO2P4-201ENST00000504193 276 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 NPM1P21-201ENST00000513394 762 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 RNU6-964P-201ENST00000516524 69 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CHRNA1P02708 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.09□□□□□ -1.43
CHRNA1P02708 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.09□□□□□ -1.43
CHRNA1P02708 HMGN2P6-201ENST00000551091 273 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 OR11J2P-201ENST00000555298 907 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.09□□□□□ -1.43
CHRNA1P02708 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHRNA1P02708 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.09□□□□□ -1.43
CHRNA1P02708 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 AL034546.1-201ENST00000623740 3693 ntBASIC6.09□□□□□ -1.43
CHRNA1P02708 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHRNA1P02708 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHRNA1P02708 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHRNA1P02708 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.09□□□□□ -1.44
CHRNA1P02708 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHRNA1P02708 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.09□□□□□ -1.44
CHRNA1P02708 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.08□□□□□ -1.44
CHRNA1P02708 AC007938.2-201ENST00000604666 2634 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 MIR133B-201ENST00000362210 119 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 RNU1-59P-201ENST00000364829 162 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 MIR765-201ENST00000390226 114 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AL009179.1-201ENST00000406085 265 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.08□□□□□ -1.44
CHRNA1P02708 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.08□□□□□ -1.44
CHRNA1P02708 AC092106.1-201ENST00000444291 373 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AL596266.1-201ENST00000448132 400 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 MEMO1P4-201ENST00000453590 386 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 COX6B1P2-201ENST00000489624 230 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.08□□□□□ -1.44
CHRNA1P02708 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.08□□□□□ -1.44
CHRNA1P02708 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.08□□□□□ -1.44
CHRNA1P02708 AL163952.1-202ENST00000569625 600 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AL513327.3-201ENST00000602618 469 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.08□□□□□ -1.44
CHRNA1P02708 AC126915.2-201ENST00000610957 190 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AL121612.2-201ENST00000612261 482 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 U1.34-201ENST00000618578 162 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 U1.31-201ENST00000620022 160 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 AC010809.3-201ENST00000621310 641 ntBASIC6.08□□□□□ -1.44
CHRNA1P02708 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHRNA1P02708 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHRNA1P02708 AL731532.1-201ENST00000623972 4236 ntBASIC6.07□□□□□ -1.44
CHRNA1P02708 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CHRNA1P02708 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.07□□□□□ -1.44
CHRNA1P02708 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.07□□□□□ -1.44
CHRNA1P02708 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CHRNA1P02708 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.07□□□□□ -1.44
CHRNA1P02708 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHRNA1P02708 AC007161.1-204ENST00000423039 460 ntBASIC6.07□□□□□ -1.44
CHRNA1P02708 AC021876.1-201ENST00000425959 359 ntBASIC6.07□□□□□ -1.44
CHRNA1P02708 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.07□□□□□ -1.44
CHRNA1P02708 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.07□□□□□ -1.44
CHRNA1P02708 CBX1P5-201ENST00000475330 559 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms