Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR1269B-201ENST00000580405 75 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC060780.2-201ENST00000589047 198 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 IMMP1LP3-201ENST00000604197 224 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC010245.2-201ENST00000606908 1167 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL021707.7-201ENST00000607991 416 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 uc_338.26-201ENST00000612659 160 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC008115.4-201ENST00000619780 775 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 MIR8080-201ENST00000622224 89 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC114786.1-201ENST00000512892 1415 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC009804.1-201ENST00000400949 179 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC073072.2-201ENST00000447425 348 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL162739.1-201ENST00000450606 307 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL603882.1-201ENST00000463059 681 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC100832.1-201ENST00000471945 383 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 COPS8P2-201ENST00000473228 627 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC008410.1-201ENST00000483777 339 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC009120.1-201ENST00000493458 473 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 MRPS16P1-201ENST00000523462 412 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR8Q1P-201ENST00000526467 655 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 MIR6719-201ENST00000622428 87 ntBASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.53□□□□□ -1.52
TMX2-CTNND1H3BSU7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 MIR223-201ENST00000385204 110 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 BX119904.3-201ENST00000428194 957 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC138761.5-201ENST00000433967 325 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR7E116P-201ENST00000448529 957 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SL51P-201ENST00000468230 285 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPS23P1-201ENST00000491662 432 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC006499.3-201ENST00000506077 748 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC044860.2-201ENST00000561005 179 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC063977.5-201ENST00000601044 974 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL583832.1-201ENST00000603227 784 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC007204.2-201ENST00000615022 616 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC018445.2-201ENST00000622987 260 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR11H2-202ENST00000641517 1085 ntBASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TMX2-CTNND1H3BSU7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms