Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DRB4X5D2U9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC009784.1-201ENST00000426484 460 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 BX323845.3-201ENST00000428215 527 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC012512.1-201ENST00000446594 718 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 RPS7P6-201ENST00000485777 579 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 DUTP1-201ENST00000493631 470 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC139365.2-201ENST00000517972 253 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC139697.1-201ENST00000548429 745 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC079600.1-201ENST00000550326 297 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC096996.1-201ENST00000563813 325 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 MIR3936-201ENST00000584304 110 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC006272.2-201ENST00000594725 163 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC108865.2-201ENST00000606881 432 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AL096712.1-201ENST00000614561 159 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AL035661.1-201ENST00000620459 1144 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC021766.1-201ENST00000624404 741 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC129915.3-201ENST00000634128 948 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AP005432.1-201ENST00000580891 3485 ntBASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DRB4X5D2U9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC018809.2-201ENST00000602436 3823 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 OR7E25P-201ENST00000344844 931 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 MIR375-201ENST00000362103 64 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 MIR621-201ENST00000384919 96 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 HMGN1P20-201ENST00000411849 300 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 SETP15-201ENST00000412724 337 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 NPM1P40-201ENST00000412758 733 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC245060.4-201ENST00000413293 1121 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 RNF10P1-201ENST00000418589 369 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 OR10T1P-201ENST00000424327 947 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC115283.1-201ENST00000427353 400 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 TMEM183AP1-205ENST00000432739 290 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 FTLP19-201ENST00000433300 394 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 DNAJA1P5-201ENST00000440278 943 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC011476.1-201ENST00000466725 307 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms