Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC114546.4-201ENST00000624413 369 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC008626.2-201ENST00000624425 248 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC093297.3-201ENST00000607056 2517 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RNU6-666P-201ENST00000363499 107 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RNA5SP514-201ENST00000363717 111 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RNU4-51P-201ENST00000364206 140 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL353133.1-201ENST00000407695 401 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SNORA11B-201ENST00000408175 129 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RN7SKP296-201ENST00000411185 341 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RPS7P9-201ENST00000414704 586 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL513175.2-201ENST00000422071 443 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL139184.1-202ENST00000422303 222 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 GAPDHP57-201ENST00000424400 585 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 HIGD1AP4-201ENST00000430194 280 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 MTND5P25-201ENST00000430499 799 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 GAPDHP19-201ENST00000431768 1005 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL389925.1-201ENST00000432257 728 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 Z83846.1-201ENST00000446798 265 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL050341.1-201ENST00000447743 313 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RPL23AP28-201ENST00000448062 470 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL589880.1-201ENST00000448271 287 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RPS6P2-201ENST00000454208 705 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 OR2AF1P-201ENST00000454899 889 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 RPS7P10-201ENST00000464254 603 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SNX18P23-201ENST00000510867 677 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 DCAF13P2-201ENST00000514188 555 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC010442.1-201ENST00000515583 816 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 OR5AK3P-201ENST00000527486 1297 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC121758.1-202ENST00000556917 658 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 ATP5F1P7-201ENST00000567330 760 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 MIR3157-201ENST00000578688 85 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC233702.7-202ENST00000582941 211 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 FAM72A-208ENST00000607379 1139 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC024255.1-201ENST00000614376 102 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 U1.41-201ENST00000617626 165 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC013470.4-201ENST00000619978 986 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC022079.1-201ENST00000621546 602 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 MIR6806-201ENST00000622141 64 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 AC138907.10-201ENST00000623708 983 ntBASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.16□□□□□ -1.42
CCM2LQ9NUG4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms