| MUC4 | Q99102 | AC008060.2-201 | ENST00000415333 | 468 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AL359853.3-201 | ENST00000423879 | 544 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AL136131.2-201 | ENST00000424283 | 348 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | HMGB1P32-201 | ENST00000425971 | 565 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC099670.2-201 | ENST00000435130 | 321 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | UBE2L5P-201 | ENST00000436446 | 465 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | MEMO1P4-201 | ENST00000453590 | 386 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC044784.1-201 | ENST00000456526 | 677 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC093166.4-201 | ENST00000457867 | 318 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RN7SL826P-201 | ENST00000479724 | 288 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | SCARNA18.1-201 | ENST00000516330 | 83 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | HMGN2P36-201 | ENST00000529541 | 409 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AP002370.2-202 | ENST00000533669 | 908 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC007569.1-202 | ENST00000547282 | 303 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | NANOGP3-201 | ENST00000605855 | 286 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AP001784.1-201 | ENST00000624107 | 428 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC021766.1-201 | ENST00000624404 | 741 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AP001153.1-201 | ENST00000641024 | 338 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | KCNMB2-210 | ENST00000617329 | 2214 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | SDAD1-203 | ENST00000395711 | 2513 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | TRPC4-204 | ENST00000379673 | 2760 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ZNF525-201 | ENST00000467003 | 6107 nt | TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | OR6C75-202 | ENST00000641576 | 4569 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC007342.5-201 | ENST00000571340 | 2142 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RAPGEF4-213 | ENST00000535187 | 3707 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | GPR87-201 | ENST00000260843 | 1608 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ZNF492-201 | ENST00000456783 | 4245 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ADAMDEC1-201 | ENST00000256412 | 2348 nt | APPRIS P3 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | KCNJ10-205 | ENST00000638728 | 4351 nt | APPRIS P1 TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ZNF521-201 | ENST00000361524 | 4871 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | MIR1203-201 | ENST00000408812 | 85 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RN7SKP59-201 | ENST00000410520 | 314 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | EIF2S2P3-201 | ENST00000428356 | 999 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AP006222.1-205 | ENST00000450734 | 457 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RN7SL269P-201 | ENST00000467795 | 305 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | SEPT7P9-201 | ENST00000475691 | 413 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RPS7P6-201 | ENST00000485777 | 579 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RN7SL57P-201 | ENST00000493687 | 290 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | CDH12P4-201 | ENST00000517835 | 295 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | CDH12P3-201 | ENST00000517935 | 295 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | CDH12P1-201 | ENST00000518435 | 295 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | LINC01033-204 | ENST00000523194 | 715 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | IGLV3-30-201 | ENST00000524362 | 298 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AP000873.2-204 | ENST00000530825 | 375 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | OR5AM1P-201 | ENST00000532136 | 1032 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AL121594.2-201 | ENST00000541658 | 472 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AL163195.3-202 | ENST00000555283 | 578 nt | APPRIS P1 TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ELOCP28-201 | ENST00000590044 | 317 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | LINC01533-204 | ENST00000590719 | 435 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC239809.3-206 | ENST00000596091 | 741 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC243829.4-201 | ENST00000620056 | 701 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | C1orf195-202 | ENST00000625027 | 441 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC005618.4-201 | ENST00000625053 | 554 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | AC005154.1-203 | ENST00000626245 | 451 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | PARD3B-214 | ENST00000622699 | 7442 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | IGF1-202 | ENST00000337514 | 7359 nt | APPRIS P3 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | TEX41-207 | ENST00000445791 | 4635 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | ZNF343-207 | ENST00000612935 | 3675 nt | APPRIS ALT2 TSL 5 BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | PLS3-201 | ENST00000289290 | 2277 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | WDPCP-203 | ENST00000409120 | 5408 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | CSDE1-202 | ENST00000339438 | 4006 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | SLC12A1-201 | ENST00000330289 | 1764 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | OR52A5-201 | ENST00000307388 | 3973 nt | APPRIS P1 BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | OR52A5-202 | ENST00000642125 | 3993 nt | APPRIS P1 BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | PSG9-202 | ENST00000270077 | 1705 nt | APPRIS P2 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | FILIP1-202 | ENST00000370020 | 4051 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| MUC4 | Q99102 | RN7SKP185-201 | ENST00000362813 | 326 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ST7-204 | ENST00000393444 | 2113 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SNORA11-201 | ENST00000408789 | 128 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SDHDP6-201 | ENST00000414693 | 480 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | TMEM196-203 | ENST00000422233 | 775 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | LINC00502-201 | ENST00000423621 | 445 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL390067.1-201 | ENST00000440009 | 420 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC064862.4-201 | ENST00000442180 | 334 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL035443.1-202 | ENST00000442841 | 586 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC105271.1-201 | ENST00000442876 | 497 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ATP5J-207 | ENST00000457143 | 589 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | RPS23P6-201 | ENST00000466136 | 431 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ARPP21-231 | ENST00000474696 | 572 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | RPL32P33-201 | ENST00000487023 | 394 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | IGHVIII-47-1-201 | ENST00000518187 | 331 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC068672.3-201 | ENST00000524017 | 824 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | OR4A42P-201 | ENST00000531397 | 938 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC007406.1-201 | ENST00000544067 | 315 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | TCEANC-205 | ENST00000544987 | 1146 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC007346.2-201 | ENST00000564816 | 892 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC009962.1-201 | ENST00000567327 | 3813 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | OOSP1P2-201 | ENST00000579644 | 351 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC114488.3-201 | ENST00000581333 | 480 nt | TSL 4 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC011451.1-201 | ENST00000591336 | 405 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC243960.1-203 | ENST00000595395 | 599 nt | TSL 4 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | COX6CP7-201 | ENST00000597056 | 208 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL513327.3-201 | ENST00000602618 | 469 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | RNF138P2-201 | ENST00000603490 | 592 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | FGF1-214 | ENST00000612258 | 3805 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ZNF253-205 | ENST00000640599 | 1208 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | MPDZ-204 | ENST00000381022 | 7589 nt | APPRIS ALT2 TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | NELL2-201 | ENST00000333837 | 2943 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | CLSPN-202 | ENST00000318121 | 4169 nt | APPRIS P3 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ALB-220 | ENST00000621628 | 1606 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |