Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LDHBP2-201ENST00000456969 1005 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 SNORA26.10-201ENST00000516427 141 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 CDC42P3-201ENST00000518493 633 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 OR11H3P-201ENST00000554547 982 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC7Q96M83 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
CCDC7Q96M83 AC012616.1-201ENST00000600294 197 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 AC010245.2-201ENST00000606908 1167 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 RPSAP73-201ENST00000614820 330 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 AC135068.5-201ENST00000624197 983 ntBASIC7.7□□□□□ -1.18
CCDC7Q96M83 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC7Q96M83 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC7Q96M83 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC7Q96M83 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 SNORA16A-201ENST00000384342 137 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 RN7SKP273-201ENST00000411392 314 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 RPL23AP27-201ENST00000415161 451 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 RPL7P56-201ENST00000429441 717 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 AC023271.1-201ENST00000445936 1090 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 AL139124.1-201ENST00000609123 421 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 AC010632.3-201ENST00000611377 369 ntBASIC7.69□□□□□ -1.18
CCDC7Q96M83 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC7Q96M83 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC7Q96M83 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC100757.1-201ENST00000616872 1835 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC079097.1-201ENST00000512187 1399 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 MIR223-201ENST00000385204 110 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 AL133270.1-201ENST00000402635 279 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 RPL35AP24-201ENST00000413846 330 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC111000.6-201ENST00000514471 709 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 HMGN2P6-201ENST00000551091 273 ntBASIC7.68□□□□□ -1.18
CCDC7Q96M83 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC7Q96M83 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC7Q96M83 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC015799.1-201ENST00000622996 3122 ntBASIC7.67□□□□□ -1.18
CCDC7Q96M83 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC073465.2-201ENST00000440938 498 ntBASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 RN7SL188P-201ENST00000469842 285 ntBASIC7.67□□□□□ -1.18
CCDC7Q96M83 RPL7P39-201ENST00000481157 744 ntBASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.67□□□□□ -1.18
CCDC7Q96M83 EIF4A2P5-201ENST00000529914 499 ntBASIC7.67□□□□□ -1.18
CCDC7Q96M83 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms