Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.79□□□□□ -1.48
RTP4Q96DX8 AC016542.1-201ENST00000608259 493 ntBASIC5.79□□□□□ -1.48
RTP4Q96DX8 AL139124.1-201ENST00000609123 421 ntBASIC5.79□□□□□ -1.48
RTP4Q96DX8 AC021766.1-201ENST00000624404 741 ntBASIC5.79□□□□□ -1.48
RTP4Q96DX8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.79□□□□□ -1.48
RTP4Q96DX8 AL139254.3-201ENST00000641097 674 ntBASIC5.79□□□□□ -1.48
RTP4Q96DX8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.79□□□□□ -1.48
RTP4Q96DX8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTP4Q96DX8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTP4Q96DX8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTP4Q96DX8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTP4Q96DX8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.79□□□□□ -1.48
RTP4Q96DX8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 GAPDHP24-201ENST00000328713 983 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 SNORA64.1-201ENST00000362600 132 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 DHFRP5-201ENST00000406944 564 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 MTND2P15-201ENST00000418575 892 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 BX323845.3-201ENST00000428215 527 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AL445665.1-202ENST00000452436 324 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 CAB39P1-201ENST00000502277 460 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 DPPA2P4-201ENST00000563717 878 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AC015849.6-201ENST00000605454 474 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 AP005431.1-201ENST00000618479 319 ntBASIC5.78□□□□□ -1.48
RTP4Q96DX8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP4Q96DX8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RTP4Q96DX8 AL592429.1-201ENST00000403909 1473 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AP002512.4-202ENST00000641599 4530 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP4Q96DX8 LINC01963-201ENST00000562038 3148 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP4Q96DX8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 RNA5SP242-201ENST00000364171 118 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 RNU6-1176P-201ENST00000390955 107 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 SNORA11B-201ENST00000408175 129 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AL390879.2-203ENST00000426943 1121 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 BX119904.3-201ENST00000428194 957 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AL022331.1-201ENST00000429025 477 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 AC092905.1-201ENST00000467527 949 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 RN7SL717P-201ENST00000478343 297 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 AL133372.1-201ENST00000493565 745 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 NENFP3-201ENST00000503735 313 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 DUTP7-201ENST00000507982 486 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 AC021106.1-201ENST00000509020 1058 ntBASIC5.77□□□□□ -1.49
RTP4Q96DX8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP4Q96DX8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms