Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-115P-201ENST00000364310 107 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 SNORA70G-201ENST00000383923 142 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-1103P-201ENST00000384150 107 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 Y_RNA.509-201ENST00000384506 99 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 FTH1P26-201ENST00000406512 701 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RPS6P23-201ENST00000413224 722 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 TMSB10P1-201ENST00000415070 132 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL157884.1-201ENST00000424561 454 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 MTCO1P20-201ENST00000425366 358 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL022163.1-201ENST00000430261 1569 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RPS24P8-201ENST00000431490 402 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL451074.3-201ENST00000437709 472 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 SKP1P1-201ENST00000438081 489 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 MTND6P13-201ENST00000443510 523 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 GAPDHP17-201ENST00000449858 1001 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC135721.2-201ENST00000464237 300 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC092757.1-201ENST00000467293 467 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RPS29P25-201ENST00000481709 171 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ENPP7P10-201ENST00000504828 933 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC022447.3-201ENST00000506865 495 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 PGAM1P8-201ENST00000526979 453 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AP005597.3-201ENST00000532369 799 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC009779.4-201ENST00000554248 611 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC139085.1-201ENST00000582716 182 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC020904.2-202ENST00000614660 1401 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AP003068.4-201ENST00000623192 802 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL355480.4-201ENST00000626823 69 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL391262.1-201ENST00000556558 1992 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL445250.1-203ENST00000641829 1535 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 EEF1A1P10-201ENST00000475365 1390 ntBASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 AC005261.2-201ENST00000593427 4258 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 Y_RNA.160-201ENST00000363677 92 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RNU6-1090P-201ENST00000364065 94 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 TDGF1P4-201ENST00000401555 520 ntBASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.3□□□□□ -1.24
DEPDC4Q8N2C3 RPS20P15-201ENST00000412792 311 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms