Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU1-65P-201ENST00000363919 148 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 RNA5SP431-201ENST00000410312 120 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 RPS24P7-201ENST00000416921 246 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC015977.1-201ENST00000418887 292 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 RPS15AP30-201ENST00000420976 390 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC130360.1-201ENST00000425489 1117 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 PRELID3BP10-201ENST00000431957 584 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AL353662.1-201ENST00000439099 327 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 CR769776.1-201ENST00000441254 787 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 MTCO1P53-201ENST00000441633 699 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 MTCO2P7-201ENST00000446518 666 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC004022.1-201ENST00000447766 1066 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 RN7SL205P-201ENST00000490174 284 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 OR2A20P-203ENST00000498397 1268 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC008427.1-201ENST00000503102 655 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 IGKV3D-25-201ENST00000519599 235 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC130365.2-201ENST00000525882 1201 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC084121.1-201ENST00000533882 835 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC010503.3-201ENST00000594355 540 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC068768.2-201ENST00000602352 343 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 Z99497.2-201ENST00000603634 310 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AL512427.1-201ENST00000618593 349 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AP003499.2-201ENST00000624100 483 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AP003486.1-201ENST00000525716 3994 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 AL355377.1-201ENST00000621125 1653 ntBASIC5.97□□□□□ -1.45
VRK3Q8IV63 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VRK3Q8IV63 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.97□□□□□ -1.45
VRK3Q8IV63 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
VRK3Q8IV63 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
VRK3Q8IV63 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.96□□□□□ -1.45
VRK3Q8IV63 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK3Q8IV63 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 PSG10P-201ENST00000501199 1500 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 Y_RNA.62-201ENST00000362840 99 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 Y_RNA.599-201ENST00000410489 109 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 RMRPP5-201ENST00000411156 267 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 RPL35AP31-201ENST00000418340 337 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 HIGD1AP4-201ENST00000430194 280 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AL392003.1-201ENST00000434394 243 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 PNKDP1-201ENST00000435914 430 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 LDHAP2-201ENST00000437325 985 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 MED6P1-201ENST00000439659 713 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AL359265.1-201ENST00000440296 795 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 OR52I1-201ENST00000450052 1050 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC118758.1-202ENST00000454719 225 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 USP9YP10-201ENST00000454868 628 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC002075.1-201ENST00000457396 676 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 BET1P1-201ENST00000482276 359 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 EIF1P7-201ENST00000487533 337 ntBASIC5.96□□□□□ -1.46
VRK3Q8IV63 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK3Q8IV63 ASNSP4-201ENST00000511103 447 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 365.1 ms