Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 HMGN2P6-201ENST00000551091 273 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 AL136520.1-202ENST00000555494 763 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 RBM22P12-201ENST00000567098 1255 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 uc_338.26-201ENST00000612659 160 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 WBP1LP8-201ENST00000617401 327 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 AL390318.1-201ENST00000624564 687 ntBASIC7.19□□□□□ -1.26
CCDC93Q567U6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC93Q567U6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC93Q567U6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 CR382285.2-201ENST00000624662 1495 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 MRE11P1-201ENST00000464884 2127 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 RNA5SP211-201ENST00000365516 117 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AL360271.1-201ENST00000395679 510 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC007068.1-201ENST00000396690 844 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 RN7SKP125-201ENST00000410481 302 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 RPL12P3-201ENST00000440080 396 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 CUBNP2-201ENST00000443534 1139 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 OR13K1P-201ENST00000444577 975 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC128716.1-201ENST00000475129 166 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC004453.1-201ENST00000487895 408 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC009120.1-201ENST00000493458 473 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 NDUFB5P1-201ENST00000508134 564 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 GARSP1-201ENST00000570895 719 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 BNIP3P39-201ENST00000601077 554 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC015802.5-201ENST00000607478 399 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC93Q567U6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 AC007842.1-201ENST00000597336 2039 ntBASIC7.18□□□□□ -1.26
CCDC93Q567U6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC93Q567U6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC93Q567U6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC93Q567U6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC93Q567U6 AL353763.1-201ENST00000624467 1628 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC93Q567U6 RNA5SP234-201ENST00000363916 119 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 RNU6-819P-201ENST00000364116 107 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 AC136624.1-201ENST00000400791 413 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 RPS26P38-201ENST00000414476 348 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 PTCD2P2-201ENST00000415579 1095 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC93Q567U6 HSFY7P-201ENST00000432672 318 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 HSFY8P-201ENST00000437934 318 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC93Q567U6 SDC4P-201ENST00000453285 601 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 HSFY5P-201ENST00000453726 309 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 RAB28P2-201ENST00000454299 641 ntBASIC7.17□□□□□ -1.26
CCDC93Q567U6 LDHBP2-201ENST00000456969 1005 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms