Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC005522.1-201ENST00000395416 346 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AP000357.1-201ENST00000409926 1165 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 RPL23AP85-201ENST00000421838 433 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 IPPKP1-201ENST00000422501 768 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 TRAPPC13P1-201ENST00000435991 1062 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL358794.1-201ENST00000445689 381 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 PPIAP20-201ENST00000449839 135 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC095052.1-201ENST00000509955 863 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC027369.2-201ENST00000528030 440 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 MRPS21P8-201ENST00000569196 235 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC012254.4-201ENST00000588843 273 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 VN1R87P-201ENST00000596706 487 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 BUB1P1-201ENST00000603541 607 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 Z82195.1-201ENST00000604558 398 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL096712.1-201ENST00000614561 159 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC011369.2-201ENST00000624423 1567 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC018717.1-201ENST00000457712 1505 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 ZNF849P-201ENST00000594711 1566 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 FUNDC2P3-201ENST00000334716 533 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 SNORD8-201ENST00000363915 110 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL023284.3-201ENST00000407767 334 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC112492.2-201ENST00000432774 1030 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 LDHAP2-201ENST00000437325 985 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 MTCO1P53-201ENST00000441633 699 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 EXOSC3P1-201ENST00000448649 500 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RSU1P1-201ENST00000453416 441 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RPS3AP53-201ENST00000454716 778 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 SLC25A51P1-201ENST00000468432 871 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RPL12P31-201ENST00000478433 450 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 LSM3P4-201ENST00000502948 309 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 IGKV3D-25-201ENST00000519599 235 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 TRIM77BP-201ENST00000524985 1119 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC125612.1-201ENST00000547580 377 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms