Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CLDN6P56747 RN7SKP99-201ENST00000517028 307 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN6P56747 AP003080.1-202ENST00000526526 915 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CLDN6P56747 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.44□□□□□ -1.54
CLDN6P56747 AL138960.1-201ENST00000613838 513 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 AL157762.1-201ENST00000619612 415 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 AC073342.3-201ENST00000624211 193 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN6P56747 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN6P56747 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN6P56747 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN6P56747 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLDN6P56747 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 AC004656.1-201ENST00000568479 4951 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 RPL23AP17-201ENST00000401064 499 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 MYL6P5-201ENST00000412707 459 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 AC015977.1-201ENST00000418887 292 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 AC016027.5-201ENST00000427227 210 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 FABP7P2-201ENST00000429946 379 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN6P56747 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 AL445687.2-201ENST00000458156 728 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 AL035690.1-201ENST00000490892 383 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 OR4A42P-201ENST00000531397 938 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN6P56747 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN6P56747 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN6P56747 AL352984.2-202ENST00000613699 155 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 MIR6810-201ENST00000622701 70 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLDN6P56747 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CLDN6P56747 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN6P56747 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLDN6P56747 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN6P56747 AC005261.2-201ENST00000593427 4258 ntBASIC5.43□□□□□ -1.54
CLDN6P56747 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 AL132656.3-201ENST00000606384 1595 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 AC011493.1-201ENST00000596753 1632 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 RNA5SP335-201ENST00000363817 110 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 RNU4-2-201ENST00000365668 141 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLDN6P56747 SNORA16A-201ENST00000384342 137 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLDN6P56747 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLDN6P56747 AL133270.1-201ENST00000402635 279 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 RPS26P38-201ENST00000414476 348 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN6P56747 RPS26P13-201ENST00000419030 330 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 AL133325.1-201ENST00000421090 382 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN6P56747 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 AC090142.2-201ENST00000483263 416 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN6P56747 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN6P56747 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.42□□□□□ -1.54
CLDN6P56747 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 MIR4420-201ENST00000583944 77 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 ZNF101P1-201ENST00000435701 1720 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 FBXL21-201ENST00000297158 1305 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms