Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HTTP42858 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.76□□□□□ -1.49
HTTP42858 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HTTP42858 AL137845.2-201ENST00000444292 988 ntBASIC5.76□□□□□ -1.49
HTTP42858 AC092754.1-201ENST00000472975 479 ntBASIC5.76□□□□□ -1.49
HTTP42858 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.76□□□□□ -1.49
HTTP42858 AC053481.3-201ENST00000577881 843 ntBASIC5.76□□□□□ -1.49
HTTP42858 VN1R85P-201ENST00000601587 426 ntBASIC5.76□□□□□ -1.49
HTTP42858 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
HTTP42858 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 AC131649.2-201ENST00000624925 4439 ntBASIC5.75□□□□□ -1.49
HTTP42858 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC5.75□□□□□ -1.49
HTTP42858 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 RNA5SP387-201ENST00000364226 106 ntBASIC5.75□□□□□ -1.49
HTTP42858 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 RN7SKP114-201ENST00000410327 279 ntBASIC5.75□□□□□ -1.49
HTTP42858 AC006946.1-201ENST00000429106 328 ntBASIC5.75□□□□□ -1.49
HTTP42858 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HTTP42858 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.75□□□□□ -1.49
HTTP42858 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 AC108751.5-201ENST00000492880 1336 ntBASIC5.75□□□□□ -1.49
HTTP42858 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.75□□□□□ -1.49
HTTP42858 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HTTP42858 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 AC009237.10-201ENST00000414112 510 ntBASIC5.75□□□□□ -1.49
HTTP42858 AC009237.5-201ENST00000414271 501 ntBASIC5.75□□□□□ -1.49
HTTP42858 OR7A15P-201ENST00000449848 1009 ntBASIC5.75□□□□□ -1.49
HTTP42858 AL445687.2-201ENST00000458156 728 ntBASIC5.75□□□□□ -1.49
HTTP42858 AC079168.1-201ENST00000458741 345 ntBASIC5.75□□□□□ -1.49
HTTP42858 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.75□□□□□ -1.49
HTTP42858 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.75□□□□□ -1.49
HTTP42858 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.75□□□□□ -1.49
HTTP42858 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HTTP42858 OR4F13P-202ENST00000560066 2054 ntBASIC5.75□□□□□ -1.49
HTTP42858 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HTTP42858 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
HTTP42858 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.74□□□□□ -1.49
HTTP42858 CEACAMP6-201ENST00000452007 574 ntBASIC5.74□□□□□ -1.49
HTTP42858 AC012339.2-201ENST00000523996 453 ntBASIC5.74□□□□□ -1.49
HTTP42858 AP003400.3-201ENST00000624904 346 ntBASIC5.74□□□□□ -1.49
HTTP42858 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
HTTP42858 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.74□□□□□ -1.49
HTTP42858 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 MFSD8-220ENST00000641243 1422 ntBASIC5.74□□□□□ -1.49
HTTP42858 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 IGKV7-3-201ENST00000357453 298 ntBASIC5.74□□□□□ -1.49
HTTP42858 AC116036.1-201ENST00000412199 367 ntBASIC5.74□□□□□ -1.49
HTTP42858 USP24P1-201ENST00000433802 779 ntBASIC5.74□□□□□ -1.49
HTTP42858 SOX5P1-201ENST00000524155 1127 ntBASIC5.74□□□□□ -1.49
HTTP42858 AC022916.3-201ENST00000592961 742 ntBASIC5.74□□□□□ -1.49
HTTP42858 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC5.74□□□□□ -1.49
HTTP42858 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.74□□□□□ -1.49
HTTP42858 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.74□□□□□ -1.49
HTTP42858 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC5.74□□□□□ -1.49
HTTP42858 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.74□□□□□ -1.49
HTTP42858 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.74□□□□□ -1.49
HTTP42858 Z97832.1-201ENST00000402490 328 ntBASIC5.74□□□□□ -1.49
HTTP42858 SNORA11.2-201ENST00000408318 127 ntBASIC5.74□□□□□ -1.49
HTTP42858 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.74□□□□□ -1.49
HTTP42858 Z95152.1-201ENST00000453556 656 ntBASIC5.74□□□□□ -1.49
HTTP42858 RN7SL319P-201ENST00000480656 221 ntBASIC5.74□□□□□ -1.49
HTTP42858 OR7E128P-201ENST00000532736 1024 ntBASIC5.74□□□□□ -1.49
HTTP42858 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.74□□□□□ -1.49
HTTP42858 AC073091.2-201ENST00000603205 907 ntBASIC5.74□□□□□ -1.49
HTTP42858 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.74□□□□□ -1.49
HTTP42858 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HTTP42858 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HTTP42858 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 HSPA8P15-201ENST00000401676 786 ntBASIC5.73□□□□□ -1.49
HTTP42858 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.73□□□□□ -1.49
HTTP42858 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.73□□□□□ -1.49
HTTP42858 MEMO1P4-201ENST00000453590 386 ntBASIC5.73□□□□□ -1.49
HTTP42858 RPL23AP56-201ENST00000460778 453 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms