Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC090607.5-201ENST00000615692 224 ntBASIC5.65□□□□□ -1.5
TRIM23P36406 AL122125.1-201ENST00000616999 600 ntBASIC5.65□□□□□ -1.5
TRIM23P36406 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM23P36406 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM23P36406 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM23P36406 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM23P36406 AC087821.1-201ENST00000623639 567 ntBASIC5.65□□□□□ -1.5
TRIM23P36406 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.65□□□□□ -1.51
TRIM23P36406 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.65□□□□□ -1.51
TRIM23P36406 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
TRIM23P36406 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 CASC19-255ENST00000641733 1385 ntBASIC5.65□□□□□ -1.51
TRIM23P36406 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM23P36406 LINC01963-201ENST00000562038 3148 ntBASIC5.65□□□□□ -1.51
TRIM23P36406 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM23P36406 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 AL034546.1-201ENST00000623740 3693 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM23P36406 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM23P36406 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TRIM23P36406 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 RNA5SP132-201ENST00000364725 118 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM23P36406 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 MIR130A-201ENST00000385274 89 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM23P36406 AL121977.1-201ENST00000401636 979 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 OR6E1P-201ENST00000414424 923 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM23P36406 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM23P36406 AC073410.1-201ENST00000435125 589 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM23P36406 LDHBP2-201ENST00000456969 1005 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 RPS23P2-201ENST00000463671 415 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM23P36406 RN7SKP5-201ENST00000517045 272 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM23P36406 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM23P36406 AC009852.2-201ENST00000567898 485 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM23P36406 RNA5SP439-201ENST00000617595 124 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 AL390318.1-201ENST00000624564 687 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 MAPK10-350ENST00000641777 965 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM23P36406 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM23P36406 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM23P36406 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM23P36406 MTCO1P11-201ENST00000429111 1528 ntBASIC5.64□□□□□ -1.51
TRIM23P36406 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TRIM23P36406 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRIM23P36406 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 MIPEPP2-201ENST00000422560 1819 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM23P36406 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM23P36406 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM23P36406 TNPO1P1-201ENST00000423641 1138 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AC092651.1-201ENST00000426110 312 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 USP24P1-201ENST00000433802 779 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 FMO7P-201ENST00000436045 768 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM23P36406 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM23P36406 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM23P36406 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 OR2A3P-201ENST00000493774 953 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 MORF4L2P1-201ENST00000503761 858 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AC138409.2-202ENST00000507274 458 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM23P36406 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM23P36406 HSPE1P2-201ENST00000554777 306 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM23P36406 AP000894.4-201ENST00000610185 483 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 AC022467.1-201ENST00000614738 749 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM23P36406 CASC19-260ENST00000641828 2001 ntBASIC5.63□□□□□ -1.51
TRIM23P36406 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms