Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RAB4AP20338 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.39□□□□□ -1.71
RAB4AP20338 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAB4AP20338 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.39□□□□□ -1.71
RAB4AP20338 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAB4AP20338 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAB4AP20338 AC130304.1-201ENST00000622942 2385 ntBASIC4.39□□□□□ -1.71
RAB4AP20338 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
RAB4AP20338 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.39□□□□□ -1.71
RAB4AP20338 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 AL138847.1-201ENST00000258651 546 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 RNU1-49P-201ENST00000363468 159 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 RAB5CP1-201ENST00000395972 580 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 EEF1GP6-201ENST00000402309 905 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 SNORA11D-201ENST00000408548 128 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 SNORA11E-201ENST00000408778 128 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 OR6E1P-201ENST00000414424 923 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 RPL18AP14-201ENST00000417685 526 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 RPS7P14-201ENST00000426405 583 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 ATP5LP4-201ENST00000434169 307 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 PPIAP10-201ENST00000438675 458 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 MTCO3P17-201ENST00000443775 513 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC021660.1-201ENST00000465006 554 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 RN7SL369P-201ENST00000477138 299 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AC113398.2-201ENST00000507630 558 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 RPL7L1P7-201ENST00000509986 724 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 SEPT10P1-201ENST00000517342 1162 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 NPM1P52-201ENST00000518264 846 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 OR4A17P-201ENST00000526032 904 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AP001858.2-201ENST00000536213 601 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC091932.1-201ENST00000569381 427 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 MIR4312-201ENST00000579909 76 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 AL137000.1-201ENST00000610528 1244 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RAB4AP20338 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RAB4AP20338 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 AC007382.1-201ENST00000624376 2618 ntBASIC4.38□□□□□ -1.71
RAB4AP20338 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RAB4AP20338 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAB4AP20338 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAB4AP20338 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAB4AP20338 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB4AP20338 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAB4AP20338 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB4AP20338 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.37□□□□□ -1.71
RAB4AP20338 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RAB4AP20338 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.37□□□□□ -1.71
RAB4AP20338 Y_RNA.62-201ENST00000362840 99 ntBASIC4.37□□□□□ -1.71
RAB4AP20338 RNA5SP375-201ENST00000362975 119 ntBASIC4.37□□□□□ -1.71
RAB4AP20338 RN7SKP191-201ENST00000364713 306 ntBASIC4.37□□□□□ -1.71
RAB4AP20338 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RAB4AP20338 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms