Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC089999.3-201ENST00000622440 577 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AL122023.1-201ENST00000622847 530 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AC135068.5-201ENST00000624197 983 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CXCL3P19876 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 MTCO1P28-201ENST00000574177 1528 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXCL3P19876 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXCL3P19876 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AL445213.1-201ENST00000412589 747 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AL357752.1-201ENST00000412817 349 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC046176.1-201ENST00000435260 1170 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CXCL3P19876 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC245291.3-201ENST00000443400 292 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC091544.1-201ENST00000484702 348 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AC074255.1-201ENST00000511259 501 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 RNA5SP303-201ENST00000516192 130 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 OR8G3P-201ENST00000533406 921 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC011840.5-201ENST00000582125 771 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.56□□□□□ -1.68
CXCL3P19876 BX005214.3-202ENST00000619809 325 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC073869.8-201ENST00000641806 335 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 LINC01613-201ENST00000561476 2780 ntBASIC4.56□□□□□ -1.68
CXCL3P19876 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.56□□□□□ -1.68
CXCL3P19876 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CXCL3P19876 RBPJP5-201ENST00000449433 1447 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CXCL3P19876 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL3P19876 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL3P19876 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 RNA5SP110-201ENST00000362638 115 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 RN7SKP28-201ENST00000364770 305 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CXCL3P19876 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 AL139805.1-201ENST00000407837 289 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CXCL3P19876 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.55□□□□□ -1.68
CXCL3P19876 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 AC007679.3-201ENST00000434035 414 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 ARMC4P1-201ENST00000438905 707 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 NPM1P33-201ENST00000438918 872 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL3P19876 PA2G4P1-201ENST00000442248 1197 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 AC092601.1-201ENST00000444526 383 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 AL450023.1-201ENST00000450868 751 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL3P19876 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 AC073610.1-201ENST00000489971 396 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 RN7SL447P-201ENST00000494711 245 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.55□□□□□ -1.68
CXCL3P19876 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.55□□□□□ -1.68
CXCL3P19876 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.55□□□□□ -1.68
CXCL3P19876 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.55□□□□□ -1.68
CXCL3P19876 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms