Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.1□□□□□ -1.27
THBS1P07996 AP004833.3-201ENST00000531893 322 ntBASIC7.1□□□□□ -1.27
THBS1P07996 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 AC020661.2-201ENST00000560114 134 ntBASIC7.1□□□□□ -1.27
THBS1P07996 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.1□□□□□ -1.27
THBS1P07996 RN7SL237P-201ENST00000580912 287 ntBASIC7.1□□□□□ -1.27
THBS1P07996 MIR4258-201ENST00000580920 91 ntBASIC7.1□□□□□ -1.27
THBS1P07996 MIR3682-201ENST00000581338 84 ntBASIC7.1□□□□□ -1.27
THBS1P07996 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 AC016629.2-201ENST00000597341 199 ntBASIC7.1□□□□□ -1.27
THBS1P07996 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.1□□□□□ -1.27
THBS1P07996 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.1□□□□□ -1.27
THBS1P07996 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 AL031658.2-201ENST00000616850 651 ntBASIC7.1□□□□□ -1.27
THBS1P07996 AC099667.1-201ENST00000624222 469 ntBASIC7.1□□□□□ -1.27
THBS1P07996 AC116563.2-201ENST00000624751 535 ntBASIC7.1□□□□□ -1.27
THBS1P07996 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.1□□□□□ -1.27
THBS1P07996 AC134503.1-201ENST00000633048 54 ntBASIC7.1□□□□□ -1.27
THBS1P07996 AC093591.3-201ENST00000634516 308 ntBASIC7.1□□□□□ -1.27
THBS1P07996 MIR1302-1-201ENST00000637932 143 ntBASIC7.1□□□□□ -1.27
THBS1P07996 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.1□□□□□ -1.27
THBS1P07996 FARSBP1-201ENST00000435808 1778 ntBASIC7.1□□□□□ -1.27
THBS1P07996 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
THBS1P07996 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
THBS1P07996 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.1□□□□□ -1.27
THBS1P07996 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 MTND4P14-201ENST00000435799 1354 ntBASIC7.09□□□□□ -1.27
THBS1P07996 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
THBS1P07996 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
THBS1P07996 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
THBS1P07996 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 RNU5D-1-201ENST00000363299 116 ntBASIC7.09□□□□□ -1.27
THBS1P07996 SNORD46-201ENST00000364043 104 ntBASIC7.09□□□□□ -1.27
THBS1P07996 Y_RNA.315-201ENST00000365117 102 ntBASIC7.09□□□□□ -1.27
THBS1P07996 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
THBS1P07996 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 RNU6-1122P-201ENST00000384449 107 ntBASIC7.09□□□□□ -1.27
THBS1P07996 PHBP1-201ENST00000392260 808 ntBASIC7.09□□□□□ -1.27
THBS1P07996 ATP5HP3-201ENST00000396994 486 ntBASIC7.09□□□□□ -1.27
THBS1P07996 RPL5P35-201ENST00000398869 816 ntBASIC7.09□□□□□ -1.27
THBS1P07996 EI24P3-201ENST00000399046 1062 ntBASIC7.09□□□□□ -1.27
THBS1P07996 GSTA10P-201ENST00000412182 576 ntBASIC7.09□□□□□ -1.27
THBS1P07996 CTSLP8-201ENST00000413075 967 ntBASIC7.09□□□□□ -1.27
THBS1P07996 AC004690.1-201ENST00000418216 328 ntBASIC7.09□□□□□ -1.27
THBS1P07996 RPL19P21-201ENST00000424919 591 ntBASIC7.09□□□□□ -1.27
THBS1P07996 VDAC1P6-201ENST00000430062 855 ntBASIC7.09□□□□□ -1.27
THBS1P07996 FCF1P1-201ENST00000432690 571 ntBASIC7.09□□□□□ -1.27
THBS1P07996 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 OR52B5P-201ENST00000435337 951 ntBASIC7.09□□□□□ -1.27
THBS1P07996 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.09□□□□□ -1.27
THBS1P07996 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 AL139135.2-201ENST00000445040 433 ntBASIC7.09□□□□□ -1.27
THBS1P07996 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 RPS20P20-201ENST00000460498 340 ntBASIC7.09□□□□□ -1.27
THBS1P07996 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 RPL12P40-201ENST00000467028 488 ntBASIC7.09□□□□□ -1.27
THBS1P07996 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.09□□□□□ -1.27
THBS1P07996 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 SCARNA20.1-201ENST00000516009 138 ntBASIC7.09□□□□□ -1.27
THBS1P07996 Vault.2-201ENST00000516519 98 ntBASIC7.09□□□□□ -1.27
THBS1P07996 AC105029.1-201ENST00000520250 669 ntBASIC7.09□□□□□ -1.27
THBS1P07996 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.09□□□□□ -1.27
THBS1P07996 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.09□□□□□ -1.27
THBS1P07996 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.09□□□□□ -1.27
THBS1P07996 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
THBS1P07996 OR6M2P-201ENST00000529831 871 ntBASIC7.09□□□□□ -1.27
THBS1P07996 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms