Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC104687.2-201ENST00000604442 342 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC016590.3-201ENST00000611171 753 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
RAPGEF3O95398 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 RNU6-819P-201ENST00000364116 107 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 SNORA62-201ENST00000365493 153 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 RNU6-398P-201ENST00000384143 109 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 RN7SKP151-201ENST00000410230 316 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 AL161722.1-201ENST00000446972 1032 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 TRY2P-201ENST00000448860 689 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.38□□□□□ -1.07
RAPGEF3O95398 SNORA70.17-201ENST00000516449 133 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 AC011447.4-201ENST00000587562 111 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.38□□□□□ -1.07
RAPGEF3O95398 AC011379.1-201ENST00000508713 3025 ntBASIC8.38□□□□□ -1.07
RAPGEF3O95398 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.38□□□□□ -1.07
RAPGEF3O95398 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.38□□□□□ -1.07
RAPGEF3O95398 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RAPGEF3O95398 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 MFSD8-239ENST00000641590 2479 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 RN7SKP126-201ENST00000411143 300 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC013410.2-201ENST00000422627 201 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC008072.1-201ENST00000434254 824 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 RNU1-88P-201ENST00000459274 128 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 RPS23P2-201ENST00000463671 415 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 PDCL3P4-201ENST00000489621 720 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 SS18L2P2-201ENST00000583960 235 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 MIR132-201ENST00000591554 101 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC013731.1-201ENST00000604340 883 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 SNORD91A-202ENST00000609620 191 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 MIR8089-201ENST00000620165 82 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 MIR6758-201ENST00000620653 63 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 AC099654.3-201ENST00000447087 1546 ntBASIC8.37□□□□□ -1.07
RAPGEF3O95398 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
RAPGEF3O95398 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RAPGEF3O95398 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 TPT1P12-201ENST00000448968 492 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.36□□□□□ -1.07
RAPGEF3O95398 AC092647.2-201ENST00000452998 253 ntBASIC8.36□□□□□ -1.07
RAPGEF3O95398 AC009127.1-201ENST00000467090 155 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms