Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC105399.1-202ENST00000447303 205 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 RPL35AP19-201ENST00000469425 329 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 HMGB1P44-201ENST00000508597 572 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC109464.1-201ENST00000511091 819 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC084033.1-201ENST00000550830 633 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 MTATP6P25-201ENST00000574491 261 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 SETP3-201ENST00000581726 813 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AC000068.2-201ENST00000608816 460 ntBASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.4□□□□□ -1.54
TRBV5-4A0A0C4DH59 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC006600.2-201ENST00000624834 2506 ntBASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TRBV5-4A0A0C4DH59 DNM1P47-203ENST00000571780 12667 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 TTC41P-205ENST00000551270 3963 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 RN7SKP69-201ENST00000365390 305 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 MTND2P40-201ENST00000436718 841 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 RPSAP39-201ENST00000467439 883 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 SNORD95-201ENST00000579879 68 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 RN7SL356P-201ENST00000582228 248 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL589674.2-201ENST00000604304 337 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL162574.1-201ENST00000615702 950 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC015799.1-201ENST00000622996 3122 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 Z83820.1-201ENST00000456978 1499 ntBASIC5.39□□□□□ -1.55
TRBV5-4A0A0C4DH59 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 OR4G1P-202ENST00000641173 1788 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 RNA5SP319-201ENST00000362768 119 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 RNA5SP242-201ENST00000364171 118 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 RNA5SP132-201ENST00000364725 118 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 MIR143-201ENST00000385300 106 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 CHEK2P5-201ENST00000423877 246 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 TAAR4P-201ENST00000454843 1039 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC100832.1-201ENST00000471945 383 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AP000926.3-201ENST00000497201 299 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 OR8G3P-201ENST00000533406 921 ntBASIC5.38□□□□□ -1.55
TRBV5-4A0A0C4DH59 BLZF2P-201ENST00000553776 1130 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms