Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RNU7-140P-201ENST00000459546 60 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 HSPE1P23-201ENST00000509838 286 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AP000662.1-201ENST00000530952 487 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 SMIM12P1-201ENST00000603004 274 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC008945.2-201ENST00000606056 604 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL158211.4-201ENST00000606988 584 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PCMTD1P7-201ENST00000634506 357 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC027559.1-201ENST00000636288 271 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 PSG10P-201ENST00000501199 1500 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 HSPD1P7-201ENST00000447985 1686 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 OR6C69P-201ENST00000394268 893 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AL109913.1-201ENST00000421173 514 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 Z99497.1-201ENST00000421282 135 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC115283.1-201ENST00000427353 400 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 ARAFP2-201ENST00000440565 559 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 PSPC1P2-201ENST00000455130 225 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC073358.1-201ENST00000505671 684 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC008837.2-201ENST00000513076 418 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 RPL10P18-201ENST00000519384 309 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC002519.2-203ENST00000567043 837 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC127024.5-201ENST00000580085 462 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC063977.7-201ENST00000594454 337 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 BMS1P7-201ENST00000602440 1052 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 AL049541.2-201ENST00000626377 555 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 MTND1P37-201ENST00000636562 264 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 OR5H6-203ENST00000642105 978 ntBASIC8.53□□□□□ -1.04
ZC3H4Q9UPT8 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
ZC3H4Q9UPT8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC011592.1-201ENST00000624647 3634 ntBASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.52□□□□□ -1.05
ZC3H4Q9UPT8 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms