Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 CASC19-238ENST00000641523 1558 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC104966.1-201ENST00000467010 1464 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 RN7SKP74-201ENST00000362849 309 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 RPSAP35-201ENST00000413753 818 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 VN1R110P-201ENST00000438988 971 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL596266.1-201ENST00000448132 400 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL122020.1-201ENST00000472287 459 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 RN7SL193P-201ENST00000491708 276 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 HMGN1P9-201ENST00000515212 298 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 IGLV3-30-201ENST00000524362 298 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC007956.1-201ENST00000555623 542 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL356801.1-201ENST00000559320 294 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AP001437.1-201ENST00000608783 456 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 MIR6793-201ENST00000612376 63 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AC000374.1-201ENST00000434698 1745 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.22□□□□□ -1.57
RIMS3Q9UJD0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RIMS3Q9UJD0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.21□□□□□ -1.57
RIMS3Q9UJD0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.21□□□□□ -1.57
RIMS3Q9UJD0 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.57
RIMS3Q9UJD0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 MRPL53P1-201ENST00000414323 319 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 RANP7-201ENST00000418085 644 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC017019.1-201ENST00000426129 261 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC126120.1-201ENST00000431082 470 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC073909.1-201ENST00000447112 999 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 PPIAP27-201ENST00000453800 265 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 RN7SL570P-201ENST00000484405 292 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC012123.2-201ENST00000485809 248 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC073610.1-201ENST00000489971 396 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 RBBP4P1-201ENST00000502424 1276 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 LDHAP1-201ENST00000509421 992 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 HSD3BP3-201ENST00000514706 994 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 RNA5SP340-201ENST00000517132 107 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC020937.1-201ENST00000519677 1013 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC093524.1-201ENST00000564266 1094 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 ARGFXP2-201ENST00000579304 949 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 uc_338.7-201ENST00000621834 124 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 CASC19-274ENST00000642018 970 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIMS3Q9UJD0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms