Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018645.2-201ENST00000609151 472 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 YES1P1-201ENST00000418510 1628 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 MFSD8-239ENST00000641590 2479 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 HSPD1P8-201ENST00000400121 1658 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC027279.1-201ENST00000568885 4284 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 RNA5SP131-201ENST00000365452 119 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 RNU6-609P-201ENST00000365459 107 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC007068.1-201ENST00000396690 844 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL391422.1-201ENST00000402155 436 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL121835.1-201ENST00000404250 354 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 PTGES3P2-201ENST00000407942 482 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 Z68694.1-201ENST00000413929 841 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 MTND4P24-201ENST00000424002 397 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL390119.1-201ENST00000440329 312 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC007000.2-201ENST00000442564 487 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC092905.1-201ENST00000467527 949 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL355032.1-201ENST00000472981 438 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC006539.1-201ENST00000481419 501 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC093663.2-201ENST00000484625 313 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 MIR4260-201ENST00000583107 67 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC011458.1-201ENST00000604034 617 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL450270.1-201ENST00000606160 391 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AL391834.1-201ENST00000609609 560 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC114786.1-201ENST00000512892 1415 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 AC022164.1-201ENST00000568767 2673 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 AP004607.3-201ENST00000530354 3915 ntBASIC6.55□□□□□ -1.36
COL20A1Q9P218 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL20A1Q9P218 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL20A1Q9P218 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC093909.5-201ENST00000621839 1799 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC009779.8-201ENST00000641684 4384 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 RN7SKP160-201ENST00000363804 340 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR3A2-201ENST00000408891 1076 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR2AT2P-201ENST00000413438 905 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 NIFKP3-201ENST00000417799 865 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms