Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 RNGTTP1-201ENST00000420965 728 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC140076.1-201ENST00000449897 361 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL513533.1-201ENST00000453728 415 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 RN7SL390P-201ENST00000470634 284 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC080188.1-201ENST00000491923 567 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 OR5M6P-201ENST00000530227 937 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC089998.3-201ENST00000549715 493 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MIR5708-201ENST00000579723 85 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MIR3176-201ENST00000582210 90 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 GLYATL1P2-202ENST00000588046 902 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL021368.3-201ENST00000607119 578 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL603758.1-201ENST00000618654 241 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 MIR1321-201ENST00000637766 79 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 NF1P9-201ENST00000629326 2008 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 C3P1-202ENST00000497718 4954 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AL022323.2-201ENST00000623239 3000 ntBASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC7.43□□□□□ -1.22
COL25A1Q9BXS0 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC092279.2-201ENST00000623742 2189 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC103591.2-201ENST00000265259 766 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 RNU6-845P-201ENST00000362578 103 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 Y_RNA.67-201ENST00000362870 100 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 SNORD81.2-201ENST00000365153 76 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 MIR548P-201ENST00000408336 84 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 RNU6-248P-201ENST00000410720 107 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 RSU1P3-201ENST00000412878 835 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ARPC3P5-201ENST00000448802 534 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 FAR2P1-206ENST00000449736 709 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 CST12P-201ENST00000457644 362 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC013787.1-201ENST00000460165 307 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC008496.1-201ENST00000509131 295 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC068134.3-201ENST00000513620 788 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC007225.2-201ENST00000562529 256 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AL355375.2-201ENST00000574825 175 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 VN1R80P-201ENST00000597126 338 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AL139286.1-201ENST00000604465 483 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC127024.6-201ENST00000621598 424 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC116563.2-201ENST00000624751 535 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 SNORA43.5-201ENST00000631270 138 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 ICE2P1-201ENST00000512800 1849 ntBASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL25A1Q9BXS0 AC048380.2-201ENST00000624725 3548 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms