Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC073869.8-201ENST00000641806 335 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC015799.1-201ENST00000622996 3122 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 ZNF658B-201ENST00000602828 3408 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AL137058.3-201ENST00000624531 3099 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 CASC19-248ENST00000641674 1356 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 RNU11-201ENST00000387069 134 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PPIAP9-201ENST00000403866 498 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AL512422.1-201ENST00000407033 553 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 SRSF1P1-201ENST00000424058 520 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 RPL12P17-201ENST00000432393 498 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 GSTM5P1-201ENST00000434751 660 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC105399.1-202ENST00000447303 205 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AL672138.1-201ENST00000450604 1015 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AL136038.1-201ENST00000497246 351 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 HMGB1P44-201ENST00000508597 572 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC011445.2-201ENST00000599274 173 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AL360012.1-201ENST00000602813 131 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 FAM72A-208ENST00000607379 1139 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC000068.2-201ENST00000608816 460 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC007786.3-201ENST00000615154 596 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 TTC41P-205ENST00000551270 3963 ntBASIC4.54□□□□□ -1.68
GAFA1Q96PS6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GAFA1Q96PS6 AC006600.2-201ENST00000624834 2506 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 RN7SKP145-201ENST00000363291 303 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MIR143-201ENST00000385300 106 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 PRUNEP1-201ENST00000425846 705 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 NAP1L4P2-201ENST00000425958 899 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MED28P3-201ENST00000444288 531 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms