Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL591167.1-201ENST00000607321 456 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 AL138960.1-201ENST00000613838 513 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 AC004801.6-201ENST00000616571 978 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.24□□□□□ -1.25
DDX11Q96FC9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
DDX11Q96FC9 AL445528.2-201ENST00000620582 470 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 AP003476.1-201ENST00000623984 516 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 AL512506.2-201ENST00000624472 458 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 AC024587.1-201ENST00000505925 2157 ntBASIC7.24□□□□□ -1.25
DDX11Q96FC9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
DDX11Q96FC9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
DDX11Q96FC9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
DDX11Q96FC9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
DDX11Q96FC9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
DDX11Q96FC9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.24□□□□□ -1.25
DDX11Q96FC9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
DDX11Q96FC9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 RNU1-49P-201ENST00000363468 159 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 HIGD1AP15-201ENST00000416198 280 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 MORF4L1P6-201ENST00000418771 268 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 RPL7P34-201ENST00000433316 712 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 GAPDHP23-201ENST00000444823 993 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 PPIAP20-201ENST00000449839 135 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 OR6C72P-201ENST00000451403 892 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 ART2BP-201ENST00000453501 499 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC002075.1-201ENST00000457396 676 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC084754.1-201ENST00000463466 464 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 RPL34P33-201ENST00000486062 334 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 RPA2P3-201ENST00000533268 770 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AP001858.2-201ENST00000536213 601 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC106730.2-201ENST00000566641 540 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC020916.2-201ENST00000591242 360 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC073333.2-201ENST00000603589 769 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 LINC00216-201ENST00000623548 1126 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AC129778.1-202ENST00000623812 261 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AL591379.1-207ENST00000635982 261 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 EIF3EP1-201ENST00000433978 1316 ntBASIC7.23□□□□□ -1.25
DDX11Q96FC9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DDX11Q96FC9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
DDX11Q96FC9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 AC018717.1-201ENST00000457712 1505 ntBASIC7.22□□□□□ -1.25
DDX11Q96FC9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 ZNF29P-201ENST00000225587 168 ntBASIC7.22□□□□□ -1.25
DDX11Q96FC9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DDX11Q96FC9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
DDX11Q96FC9 MIR130B-202ENST00000385018 82 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms