Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.34□□□□□ -1.56
HMGCS1Q01581 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AP001029.2-203ENST00000589795 4910 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 AL162456.1-201ENST00000634535 2006 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 HMGB1P20-201ENST00000402555 677 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC083899.1-201ENST00000454465 3819 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 LDHBP3-201ENST00000514909 822 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 SEPT10P1-201ENST00000517342 1162 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC027243.2-201ENST00000602530 724 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC025574.2-201ENST00000615621 514 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AP005431.1-201ENST00000618479 319 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGCS1Q01581 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 AC091305.2-201ENST00000624049 1576 ntBASIC5.33□□□□□ -1.56
HMGCS1Q01581 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGCS1Q01581 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AL592429.1-201ENST00000403909 1473 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 RNA5SP394-201ENST00000364216 119 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 RN7SKP186-201ENST00000365371 303 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 RPS3AP2-201ENST00000407190 754 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 NACAP7-201ENST00000407371 609 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC007161.1-204ENST00000423039 460 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AP000547.1-201ENST00000454360 617 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 PSAT1P4-201ENST00000466500 526 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 UBFD1P1-201ENST00000473259 814 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC105420.1-201ENST00000504389 582 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC021106.1-201ENST00000509020 1058 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC090568.1-201ENST00000509499 856 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 IGKV2-4-201ENST00000523070 340 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 H3F3BP2-201ENST00000583907 357 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 AL162574.1-201ENST00000615702 950 ntBASIC5.32□□□□□ -1.56
HMGCS1Q01581 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGCS1Q01581 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCS1Q01581 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL022311.1-201ENST00000623726 19416 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms