Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 AC079753.1-201ENST00000623243 3868 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC119674.1-213ENST00000641177 1386 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 AC105749.1-201ENST00000631338 2008 ntBASIC5.77□□□□□ -1.49
CLRN1P58418 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CLRN1P58418 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLRN1P58418 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 AC105235.1-201ENST00000623208 1816 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 CASC19-243ENST00000641588 1546 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC010894.1-201ENST00000313760 361 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 SNORD113-6-201ENST00000363345 75 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CLRN1P58418 MRPS6P2-201ENST00000381143 370 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 YWHAZP4-201ENST00000392459 708 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 MIR1266-201ENST00000408125 84 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 SEPT2P1-201ENST00000419651 180 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC006509.1-201ENST00000420788 634 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC246680.2-201ENST00000422106 389 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 NPM1P23-201ENST00000440193 849 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 MTCYBP42-201ENST00000444653 1130 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 MYO5BP2-201ENST00000449815 1277 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.76□□□□□ -1.49
CLRN1P58418 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 RPL23AP44-201ENST00000482216 473 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 OR2A20P-203ENST00000498397 1268 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC093890.1-201ENST00000502554 540 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 AC131935.1-201ENST00000524621 333 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 DEFB130C-202ENST00000530001 230 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 SETP1-201ENST00000556014 845 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC090695.1-201ENST00000561269 1222 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC134669.1-201ENST00000581275 672 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 SYPL1P2-201ENST00000582878 727 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 MIR3159-201ENST00000584572 74 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 RPL29P33-201ENST00000587474 316 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC036176.3-201ENST00000602456 418 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AC018618.2-201ENST00000604770 446 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 HIRAP1-201ENST00000605318 787 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC090425.2-201ENST00000608818 501 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 VIS1.1-201ENST00000610517 203 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC073569.3-201ENST00000619055 682 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 TCL6_3.1-201ENST00000619064 137 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 AL603755.1-201ENST00000619504 163 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC067852.7-201ENST00000623270 535 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 CLUHP10-201ENST00000631979 980 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLRN1P58418 AC135068.11-201ENST00000636378 921 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLRN1P58418 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.76□□□□□ -1.49
CLRN1P58418 SAGE3P-201ENST00000619800 1635 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 AC005261.4-201ENST00000600047 1385 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 DDX43P2-201ENST00000604753 1354 ntBASIC5.76□□□□□ -1.49
CLRN1P58418 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLRN1P58418 OLMALINC-203ENST00000641087 3779 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms