Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SIAH1P1-201ENST00000479411 923 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RIPK4P57078 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.25□□□□□ -1.25
RIPK4P57078 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.25□□□□□ -1.25
RIPK4P57078 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.25□□□□□ -1.25
RIPK4P57078 OR5AM1P-201ENST00000532136 1032 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RIPK4P57078 AC078878.1-201ENST00000539832 958 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RIPK4P57078 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RIPK4P57078 MIR4489-201ENST00000578869 62 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 AP005403.1-201ENST00000579720 229 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.25□□□□□ -1.25
RIPK4P57078 AP001357.1-201ENST00000586304 1053 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
RIPK4P57078 AC000068.2-201ENST00000608816 460 ntBASIC7.25□□□□□ -1.25
RIPK4P57078 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RIPK4P57078 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
RIPK4P57078 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RIPK4P57078 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RIPK4P57078 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.24□□□□□ -1.25
RIPK4P57078 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 AC004158.1-201ENST00000564508 4319 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.24□□□□□ -1.25
RIPK4P57078 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 RPL5P2-201ENST00000429598 854 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.24□□□□□ -1.25
RIPK4P57078 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.24□□□□□ -1.25
RIPK4P57078 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.24□□□□□ -1.25
RIPK4P57078 AC007386.1-201ENST00000455212 582 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 RN7SL51P-201ENST00000468230 285 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.24□□□□□ -1.25
RIPK4P57078 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.24□□□□□ -1.25
RIPK4P57078 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.24□□□□□ -1.25
RIPK4P57078 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 AP000864.1-201ENST00000609424 650 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 PCA3_2.1-201ENST00000612507 409 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 AL512624.1-201ENST00000613638 469 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 AC005840.5-201ENST00000619166 599 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RIPK4P57078 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RIPK4P57078 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 AC004076.2-201ENST00000620532 3323 ntBASIC7.24□□□□□ -1.25
RIPK4P57078 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RIPK4P57078 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RIPK4P57078 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
RIPK4P57078 SAMM50P1-201ENST00000455403 1399 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.23□□□□□ -1.25
RIPK4P57078 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 CFL1P1-202ENST00000432948 411 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 AC108751.3-201ENST00000461814 1020 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 RPS26P39-201ENST00000469206 341 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.23□□□□□ -1.25
RIPK4P57078 RN7SKP99-201ENST00000517028 307 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.23□□□□□ -1.25
RIPK4P57078 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.23□□□□□ -1.25
RIPK4P57078 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.23□□□□□ -1.25
RIPK4P57078 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.23□□□□□ -1.25
RIPK4P57078 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RIPK4P57078 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.23□□□□□ -1.25
RIPK4P57078 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.23□□□□□ -1.25
RIPK4P57078 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RIPK4P57078 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
RIPK4P57078 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 MAPK10-338ENST00000641647 3362 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 U3.23-201ENST00000391132 200 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 RN7SKP59-201ENST00000410520 314 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 NPM1P4-201ENST00000414095 812 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 RPL7P56-201ENST00000429441 717 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 CYCSP12-201ENST00000437729 300 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 AL133445.1-201ENST00000467051 452 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.22□□□□□ -1.25
RIPK4P57078 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms