Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH6P55285 AC027243.2-201ENST00000602530 724 ntBASIC5.78□□□□□ -1.48
CDH6P55285 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 AC007786.3-201ENST00000615154 596 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC025574.2-201ENST00000615621 514 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH6P55285 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 MIR193BHG-214ENST00000641765 509 ntBASIC5.78□□□□□ -1.48
CDH6P55285 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CDH6P55285 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.77□□□□□ -1.49
CDH6P55285 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.77□□□□□ -1.49
CDH6P55285 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH6P55285 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH6P55285 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CDH6P55285 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH6P55285 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
CDH6P55285 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH6P55285 RNA5SP510-201ENST00000364697 99 ntBASIC5.77□□□□□ -1.49
CDH6P55285 RNA5SP284-201ENST00000384547 118 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AC093155.2-201ENST00000420734 937 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH6P55285 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 MTND2P40-201ENST00000436718 841 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AL359265.1-201ENST00000440296 795 ntBASIC5.77□□□□□ -1.49
CDH6P55285 CYCSP51-201ENST00000443545 318 ntBASIC5.77□□□□□ -1.49
CDH6P55285 MED28P3-201ENST00000444288 531 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AC005297.1-201ENST00000444765 862 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 PSAT1P4-201ENST00000466500 526 ntBASIC5.77□□□□□ -1.49
CDH6P55285 RN7SL583P-201ENST00000475692 287 ntBASIC5.77□□□□□ -1.49
CDH6P55285 PSMA2P2-201ENST00000504319 686 ntBASIC5.77□□□□□ -1.49
CDH6P55285 SNORD46.2-201ENST00000516021 102 ntBASIC5.77□□□□□ -1.49
CDH6P55285 CYCSP22-201ENST00000517555 339 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH6P55285 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH6P55285 AC107993.1-201ENST00000591343 684 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AL139124.1-201ENST00000609123 421 ntBASIC5.77□□□□□ -1.49
CDH6P55285 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH6P55285 MIR6861-201ENST00000618657 64 ntBASIC5.77□□□□□ -1.49
CDH6P55285 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH6P55285 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH6P55285 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH6P55285 SAMM50P1-201ENST00000455403 1399 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AC079097.1-201ENST00000512187 1399 ntBASIC5.77□□□□□ -1.49
CDH6P55285 AC005261.6-201ENST00000623072 1387 ntBASIC5.77□□□□□ -1.49
CDH6P55285 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH6P55285 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH6P55285 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 AC092451.3-201ENST00000625067 1343 ntBASIC5.76□□□□□ -1.49
CDH6P55285 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 AC114786.1-201ENST00000512892 1415 ntBASIC5.76□□□□□ -1.49
CDH6P55285 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH6P55285 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CDH6P55285 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH6P55285 OR56A4-201ENST00000330728 1209 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 RN7SKP145-201ENST00000363291 303 ntBASIC5.76□□□□□ -1.49
CDH6P55285 RN7SKP292-201ENST00000365522 317 ntBASIC5.76□□□□□ -1.49
CDH6P55285 OR2AT2P-201ENST00000413438 905 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AC007161.1-204ENST00000423039 460 ntBASIC5.76□□□□□ -1.49
CDH6P55285 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH6P55285 AL662874.1-201ENST00000426065 230 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 BX119321.1-201ENST00000428912 797 ntBASIC5.76□□□□□ -1.49
CDH6P55285 RPL23AP19-201ENST00000436229 369 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AC073465.2-201ENST00000440938 498 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AL136455.1-201ENST00000441083 1240 ntBASIC5.76□□□□□ -1.49
CDH6P55285 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH6P55285 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 AC109481.1-201ENST00000509173 282 ntBASIC5.76□□□□□ -1.49
CDH6P55285 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH6P55285 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH6P55285 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH6P55285 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH6P55285 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH6P55285 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH6P55285 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms