Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RNF144AP50876 Y_RNA.97-201ENST00000363094 102 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 Y_RNA.166-201ENST00000363730 102 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 RN7SKP76-201ENST00000364419 323 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 RNU6-1300P-201ENST00000391046 108 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 RPL5P5-201ENST00000392009 893 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 OR4K12P-201ENST00000406538 961 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AL603766.1-201ENST00000407763 664 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 RPA2P2-201ENST00000419698 796 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 NCOR1P3-201ENST00000420479 303 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 OR5P4P-201ENST00000424698 917 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 HMGN2P24-201ENST00000433516 273 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 RPL7P11-201ENST00000437586 658 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 PPIAP17-201ENST00000438507 471 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 EFCAB14P1-201ENST00000442409 463 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 CEACAMP5-201ENST00000448037 961 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC108064.1-201ENST00000513791 460 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 RN7SKP14-201ENST00000516000 329 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 RNU6-416P-201ENST00000516265 103 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 RBMS2P1-201ENST00000525031 1226 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.25□□□□□ -1.25
RNF144AP50876 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC144548.1-201ENST00000549577 324 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AC026111.1-201ENST00000551090 1195 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC018638.8-201ENST00000588755 281 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF144AP50876 CARSP1-201ENST00000603171 889 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 AP001521.2-201ENST00000608772 546 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC090527.3-201ENST00000619041 548 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC110769.3-201ENST00000624567 1173 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 TSHZ2-205ENST00000626626 670 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 AL359922.2-201ENST00000581788 3017 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF144AP50876 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF144AP50876 AC138627.1-203ENST00000641872 1680 ntBASIC7.25□□□□□ -1.25
RNF144AP50876 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF144AP50876 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 DDX18P6-201ENST00000450119 1997 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF144AP50876 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 TMSB4XP2-201ENST00000335179 210 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF144AP50876 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 SNORA7B-201ENST00000384360 139 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF144AP50876 RPL23AP29-201ENST00000397284 453 ntBASIC7.24□□□□□ -1.25
RNF144AP50876 AL122016.1-201ENST00000403365 367 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms